4.6 Article

Tentacle Transcriptomes of the Speckled Anemone (Actiniaria: Actiniidae: Oulactis sp.): Venom-Related Components and Their Domain Structure

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Chemistry, Medicinal

Transcriptomic and Proteomic Analysis of the Tentacles and Mucus of Anthopleura dowii Verrill, 1869

Santos Ramirez-Carreto et al.

MARINE DRUGS (2019)

Article Pharmacology & Pharmacy

Mapping the chemical and sequence space of the ShKT superfamily

Thomas Shafee et al.

TOXICON (2019)

Article Biochemistry & Molecular Biology

Peptide therapeutics from venom: Current status and potential

Michael W. Pennington et al.

BIOORGANIC & MEDICINAL CHEMISTRY (2018)

Article Pharmacology & Pharmacy

Stichodactyla helianthus' de novo transcriptome assembly: Discovery of a new actinoporin isoform

Esperanza Rivera-de-Torre et al.

TOXICON (2018)

Review Food Science & Technology

Sea Anemones: Quiet Achievers in the Field of Peptide Toxins

Peter J. Prentis et al.

TOXINS (2018)

Article Biology

Dynamics of venom composition across a complex life cycle

Yaara Y Columbus-Shenkar et al.

Article Biochemistry & Molecular Biology

Identification, chemical synthesis, structure, and function of a new KV1 channel blocking peptide from Oulactis sp.

Punnepalli Sunanda et al.

PEPTIDE SCIENCE (2018)

Article Biochemistry & Molecular Biology

SMS: Smart Model Selection in PhyML

Vincent Lefort et al.

MOLECULAR BIOLOGY AND EVOLUTION (2017)

Article Biochemical Research Methods

Salmon provides fast and bias-aware quantification of transcript expression

Rob Patro et al.

NATURE METHODS (2017)

Review Biochemistry & Molecular Biology

Peptide blockers of Kv1.3 channels in T cells as therapeutics for autoimmune disease

K. George Chandy et al.

CURRENT OPINION IN CHEMICAL BIOLOGY (2017)

Article Biochemistry & Molecular Biology

A single-point mutation enhances dual functionality of a scorpion toxin

Xueli Wang et al.

COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY (2016)

Article Evolutionary Biology

Tissue-Specific Venom Composition and Differential Gene Expression in Sea Anemones

Jason Macrander et al.

GENOME BIOLOGY AND EVOLUTION (2016)

Article Food Science & Technology

Evolution of the Cytolytic Pore-Forming Proteins (Actinoporins) in Sea Anemones

Jason Macrander et al.

TOXINS (2016)

Article Biochemical Research Methods

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

Felipe A. Simao et al.

BIOINFORMATICS (2015)

Article Biochemical Research Methods

SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads

Yinlong Xie et al.

BIOINFORMATICS (2014)

Article Biochemical Research Methods

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony M. Bolger et al.

BIOINFORMATICS (2014)

Article Toxicology

Dose and time dependence of box jellyfish antivenom

Athena Andreosso et al.

JOURNAL OF VENOMOUS ANIMALS AND TOXINS INCLUDING TROPICAL DISEASES (2014)

Article Biochemistry & Molecular Biology

Pfam: the protein families database

Robert D. Finn et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Biochemistry & Molecular Biology

A novel sea anemone peptide that inhibits acid-sensing ion channels

Armando Alexei Rodriguez et al.

PEPTIDES (2014)

Article Multidisciplinary Sciences

Evolution of separate predation- and defence-evoked venoms in carnivorous cone snails

Sebastien Dutertre et al.

NATURE COMMUNICATIONS (2014)

Article Biotechnology & Applied Microbiology

Optimizing de novo assembly of short-read RNA-seq data for phylogenomics

Ya Yang et al.

BMC GENOMICS (2013)

Article Biochemical Research Methods

Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels

Marcel H. Schulz et al.

BIOINFORMATICS (2012)

Article Biochemistry & Molecular Biology

A natural point mutation changes both target selectivity and mechanism of action of sea anemone toxins

Steve Peigneur et al.

FASEB JOURNAL (2012)

Article Biochemistry & Molecular Biology

KEGG for integration and interpretation of large-scale molecular data sets

Minoru Kanehisa et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biology

Neurotoxin localization to ectodermal gland cells uncovers an alternative mechanism of venom delivery in sea anemones

Yehu Moran et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2012)

Article Biotechnology & Applied Microbiology

Full-length transcriptome assembly from RNA-Seq data without a reference genome

Manfred G. Grabherr et al.

NATURE BIOTECHNOLOGY (2011)

Letter Biochemical Research Methods

SignalP 4.0: discriminating signal peptides from transmembrane regions

Thomas Nordahl Petersen et al.

NATURE METHODS (2011)

Article Biochemistry & Molecular Biology

HMMER web server: interactive sequence similarity searching

Robert D. Finn et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemical Research Methods

Universal sample preparation method for proteome analysis

Jacek R. Wisniewski et al.

NATURE METHODS (2009)

Article Biochemistry & Molecular Biology

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

Daniel R. Zerbino et al.

GENOME RESEARCH (2008)

Article Biochemistry & Molecular Biology

The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods

Sebastien Moretti et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biochemistry & Molecular Biology

RNAmmer:: consistent and rapid annotation of ribosomal RNA genes

Karin Lagesen et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Evolutionary Biology

Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative

Maria Anisimova et al.

SYSTEMATIC BIOLOGY (2006)

Article Biochemistry & Molecular Biology

M-Coffee: combining multiple sequence alignment methods with T-Coffee

IM Wallace et al.

NUCLEIC ACIDS RESEARCH (2006)

Review Biotechnology & Applied Microbiology

Peptide toxins in sea anemones: Structural and functional aspects

T Honma et al.

MARINE BIOTECHNOLOGY (2006)

Article Biochemistry & Molecular Biology

Actinoporins from the Sea of Japan anemone Oulactis orientalis: Isolation and partial characterization

AP Il'ina et al.

RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY (2005)

Article Biochemistry & Molecular Biology

AUGUSTUS: a web server for gene finding in eukaryotes

M Stanke et al.

NUCLEIC ACIDS RESEARCH (2004)

Review Zoology

The behavioral and developmental physiology of nematocysts

G Kass-Simon et al.

CANADIAN JOURNAL OF ZOOLOGY (2002)

Review Pharmacology & Pharmacy

Cytolytic peptide and protein toxins from sea anemones (Anthozoa: Actiniaria)

G Anderluh et al.

TOXICON (2002)

Article Biochemistry & Molecular Biology

A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach

S Whelan et al.

MOLECULAR BIOLOGY AND EVOLUTION (2001)

Article Biochemistry & Molecular Biology

Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes

A Krogh et al.

JOURNAL OF MOLECULAR BIOLOGY (2001)

Article Biochemistry & Molecular Biology

T-Coffee: A novel method for fast and accurate multiple sequence alignment

C Notredame et al.

JOURNAL OF MOLECULAR BIOLOGY (2000)

Article Biochemistry & Molecular Biology

Equistatin, a protease inhibitor from the sea anemone Actinia equina, is composed of three structural and functional domains

B Strukelj et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2000)