Impact of the gut microbiome on immune checkpoint inhibitor efficacy-a systematic review

Background Immune checkpoint inhibitors (ICIS) are increasingly being used in clinical practice, improving outcomes for cancer patients. Preclinical models showed significant interaction between the gut microbiome (GM) and response to wits. However, that interaction remains unclear in clinical practice. Methods We performed a systematic review in MEDLINE to determine whether antibiotics affect ICI efficacy, whether baseline GM composition and ICI efficacy show any correlations, whether baseline GM composition and emergence of immune-related adverse events (irAES) show any correlations, and whether GM manipulation can alleviate the irAES. Included publications had to be written in English or French and had to describe a quantifiable link between GM composition or its modification and the response to ICIS or the occurrence of irAES, or both. Results Of 1451 articles published before December 2018, 13 publications met the inclusion criteria. Five full-text articles and two abstracts highlighted a negative effect of antibiotics on ICI efficacy. The composition of the GM was associated with ICI efficacy in five full-text articles and one abstract, and with irAES in two full-text articles. In 2 cases, fecal microbiota transplantation was reported to reduce immune colitis. Conclusions If possible, antibiotics should be avoided before ICI treatment because of their negative effect on ICI anticancer efficacy. No specific commensal bacterium was associated with ICI efficacy, but an intact GM with high bacterial diversity and a good ratio of responder-associated bacteria to non-responder-associated bacteria seem to be correlated with better patient outcomes. Fecal microbiota transplantation is a promising technique for reducing ICI-associated colitis.