4.7 Article

RGAugury: a pipeline for genome-wide prediction of resistance gene analogs (RGAs) in plants

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

PANTHER version 10: expanded protein families and functions, and analysis tools

Huaiyu Mi et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Agronomy

A saturated SNP linkage map for the orange wheat blossom midge resistance gene Sm1

Mulualem T. Kassa et al.

THEORETICAL AND APPLIED GENETICS (2016)

Article Biotechnology & Applied Microbiology

Identification and distribution of the NBS-LRR gene family in the Cassava genome

Roberto Lozano et al.

BMC GENOMICS (2015)

Review Biochemistry & Molecular Biology

Disease Resistance Gene Analogs (RGAs) in Plants

Manoj Kumar Sekhwal et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2015)

Review Plant Sciences

Immune receptor complexes at the plant cell surface

Hannah Boehm et al.

CURRENT OPINION IN PLANT BIOLOGY (2014)

Review Immunology

Plant pattern-recognition receptors

Cyril Zipfel

TRENDS IN IMMUNOLOGY (2014)

Article Multidisciplinary Sciences

Identification of Wheat Gene Sr35 That Confers Resistance to Ug99 Stem Rust Race Group

Cyrille Saintenac et al.

SCIENCE (2013)

Article Multidisciplinary Sciences

The Gene Sr33, an Ortholog of Barley Mla Genes, Encodes Resistance to Wheat Stem Rust Race Ug99

Sambasivam Periyannan et al.

SCIENCE (2013)

Review Plant Sciences

Plant pattern recognition receptor complexes at the plasma membrane

Jacqueline Monaghan et al.

CURRENT OPINION IN PLANT BIOLOGY (2012)

Article Biochemistry & Molecular Biology

A genome-wide comparison of NB-LRR type of resistance gene analogs (RGA) in the plant kingdom

Jungeun Kim et al.

MOLECULES AND CELLS (2012)

Article Biochemistry & Molecular Biology

Phytozome: a comparative platform for green plant genomics

David M. Goodstein et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biochemical Research Methods

Accelerated Profile HMM Searches

Sean R. Eddy

PLOS COMPUTATIONAL BIOLOGY (2011)

Article Biochemistry & Molecular Biology

The Pfam protein families database

Robert D. Finn et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biochemistry & Molecular Biology

PRGdb: a bioinformatics platform for plant resistance gene analysis

Walter Sanseverino et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biochemical Research Methods

BLAST plus : architecture and applications

Christiam Camacho et al.

BMC BIOINFORMATICS (2009)

Review Multidisciplinary Sciences

The plant immune system

Jonathan D. G. Jones et al.

NATURE (2006)

Article Multidisciplinary Sciences

Plant cells recognize chitin fragments for defense signaling through a plasma membrane receptor

Hanae Kaku et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Biochemistry & Molecular Biology

InterProScan: protein domains identifier

E Quevillon et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Plant Sciences

Phylogenomic analysis of the receptor-like proteins of rice and arabidopsis

LK Fritz-Laylin et al.

PLANT PHYSIOLOGY (2005)

Article Biochemistry & Molecular Biology

A combined transmembrane topology and signal peptide prediction method

L Käll et al.

JOURNAL OF MOLECULAR BIOLOGY (2004)

Article Biochemistry & Molecular Biology

Comparative analysis of the receptor-like kinase family in Arabidopsis and rice

SH Shiu et al.

PLANT CELL (2004)

Review Biochemistry & Molecular Biology

Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis

BC Meyers et al.

PLANT CELL (2003)

Article Biochemistry & Molecular Biology

Diversity in nucleotide binding site-leucine-rich repeat genes in cereals

JF Bai et al.

GENOME RESEARCH (2002)

Article Plant Sciences

Arabidopsis map-based cloning in the post-genome era

G Jander et al.

PLANT PHYSIOLOGY (2002)

Article Multidisciplinary Sciences

Receptor-like kinases from Arabidopsis form a monophyletic gene family related to animal receptor kinases

SH Shiu et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)

Article Biochemical Research Methods

InterProScan - an integration platform for the signature-recognition methods in InterPro

EM Zdobnov et al.

BIOINFORMATICS (2001)

Article Biochemistry & Molecular Biology

Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes

A Krogh et al.

JOURNAL OF MOLECULAR BIOLOGY (2001)

Article Multidisciplinary Sciences

Broad-spectrum mildew resistance in Arabidopsis thaliana mediated by RPW8

SY Xiao et al.

SCIENCE (2001)

Article Biochemical Research Methods

A greedy algorithm for aligning DNA sequences

Z Zhang et al.

JOURNAL OF COMPUTATIONAL BIOLOGY (2000)

Article Biochemistry & Molecular Biology

Divergent evolution of plant NBS-LRR resistance gene homologues in dicot and cereal genomes

QL Pan et al.

JOURNAL OF MOLECULAR EVOLUTION (2000)

Article Biochemistry & Molecular Biology

SMART: a web-based tool for the study of genetically mobile domains

J Schultz et al.

NUCLEIC ACIDS RESEARCH (2000)