4.4 Article

Chloroplast genomes as a tool to resolve red algal phylogenies: a case study in the Nemaliales

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biotechnology & Applied Microbiology

Chloroplast genome of Sargassum horneri (Sargassaceae, Phaeophyceae): comparative chloroplast genomics of brown algae

Feng Liu et al.

JOURNAL OF APPLIED PHYCOLOGY (2016)

Article Biochemistry & Molecular Biology

Multigene phylogeny of the red algal subclass Nemaliophycidae

Daryl W. Lam et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2016)

Article Biochemistry & Molecular Biology

Chloroplast phylogenomic data from the green algal order Sphaeropleales (Chlorophyceae, Chlorophyta) reveal complex patterns of sequence evolution

Karolina Fucikova et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2016)

Article Multidisciplinary Sciences

Chloroplast Phylogenomic Inference of Green Algae Relationships

Linhua Sun et al.

SCIENTIFIC REPORTS (2016)

Article Multidisciplinary Sciences

Divergence time estimates and the evolution of major lineages in the florideophyte red algae

Eun Chan Yang et al.

SCIENTIFIC REPORTS (2016)

Article Evolutionary Biology

Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae

Heather M. Hunsperger et al.

BMC EVOLUTIONARY BIOLOGY (2015)

Article Plant Sciences

THE PLASTID GENOME OF THE RED ALGA LAURENCIA

Heroen Verbruggen et al.

JOURNAL OF PHYCOLOGY (2015)

Article Plant Sciences

Chloroplast phylogenomics resolves key relationships in ferns

Jin-Mei Lu et al.

JOURNAL OF SYSTEMATICS AND EVOLUTION (2015)

Article Biochemical Research Methods

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

Alexandros Stamatakis

BIOINFORMATICS (2014)

Review Evolutionary Biology

A field guide to whole-genome sequencing, assembly and annotation

Robert Ekblom et al.

EVOLUTIONARY APPLICATIONS (2014)

Editorial Material Multidisciplinary Sciences

The trouble with (group II) introns

W. Ford Doolittle

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Review Ecology

High-Throughput Genomic Data in Systematics and Phylogenetics

Emily Moriarty Lemmon et al.

ANNUAL REVIEW OF ECOLOGY, EVOLUTION, AND SYSTEMATICS, VOL 44 (2013)

Article Evolutionary Biology

Chloroplast Phylogenomics Indicates that Ginkgo biloba Is Sister to Cycads

Chung-Shien Wu et al.

GENOME BIOLOGY AND EVOLUTION (2013)

Article Biotechnology & Applied Microbiology

Effective DNA extraction method for fragment analysis using capillary sequencer of the kelp, Saccharina

Takashi Maeda et al.

JOURNAL OF APPLIED PHYCOLOGY (2013)

Article Biochemistry & Molecular Biology

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

Kazutaka Katoh et al.

MOLECULAR BIOLOGY AND EVOLUTION (2013)

Article Multidisciplinary Sciences

The Plastid Genome of the Red Macroalga Grateloupia taiwanensis (Halymeniaceae)

Michael S. DePriest et al.

PLOS ONE (2013)

Article Biochemistry & Molecular Biology

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

Robert Lanfear et al.

MOLECULAR BIOLOGY AND EVOLUTION (2012)

Article Biochemical Research Methods

A Detailed History of Intron-rich Eukaryotic Ancestors Inferred from a Global Survey of 100 Complete Genomes

Miklos Csuros et al.

PLOS COMPUTATIONAL BIOLOGY (2011)

Article Biochemistry & Molecular Biology

Evolution of reduced and compact chloroplast genomes (cpDNAs) in gnetophytes: Selection toward a lower-cost strategy

Chung-Shien Wu et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2009)

Article Biochemical Research Methods

Identifying bacterial genes and endosymbiont DNA with Glimmer

Arthur L. Delcher et al.

BIOINFORMATICS (2007)

Article Biochemistry & Molecular Biology

A fast and inexpensive DNA extraction/purification protocol for brown macroalgae

Galice Hoarau et al.

MOLECULAR ECOLOGY NOTES (2007)

Article Biochemistry & Molecular Biology

The chloroplast genome sequence of Chara vulgaris sheds new light into the closest green algal relatives of land plants

Monique Turmel et al.

MOLECULAR BIOLOGY AND EVOLUTION (2006)

Article Multidisciplinary Sciences

Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D

M Matsuzaki et al.

NATURE (2004)

Article Biochemistry & Molecular Biology

RevTrans: multiple alignment of coding DNA from aligned amino acid sequences

R Wernersson et al.

NUCLEIC ACIDS RESEARCH (2003)

Review Genetics & Heredity

The ins and outs of group II introns

L Bonen et al.

TRENDS IN GENETICS (2001)