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Ana M. Matia-Gonzalez et al.
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Ci Chu et al.
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Ci Chu et al.
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STRING v10: protein-protein interaction networks, integrated over the tree of life
Damian Szklarczyk et al.
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R Maruyama et al.
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MH Lee et al.
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MC Vella et al.
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J Rappsilber et al.
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