4.7 Article

Functional Multigenomic Screening of Human-Associated Bacteria for NF-κB-Inducing Bioactive Effectors

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biotechnology & Applied Microbiology

A human gut bacterial genome and culture collection for improved metagenomic analyses

Samuel C. Forster et al.

NATURE BIOTECHNOLOGY (2019)

Article Biotechnology & Applied Microbiology

1,520 reference genomes from cultivated human gut bacteria enable functional microbiome analyses

Yuanqiang Zou et al.

NATURE BIOTECHNOLOGY (2019)

Article Biochemistry & Molecular Biology

The Pfam protein families database in 2019

Sara El-Gebali et al.

NUCLEIC ACIDS RESEARCH (2019)

Article Multidisciplinary Sciences

Species Level Description of the Human Ileal Bacterial Microbiota

Heidi Cecilie Villmones et al.

SCIENTIFIC REPORTS (2018)

Article Multidisciplinary Sciences

Alpha-kinase 1 is a cytosolic innate immune receptor for bacterial ADP-heptose

Ping Zhou et al.

NATURE (2018)

Review Biochemistry & Molecular Biology

The Role of Carbohydrates in the Lipopolysaccharide (LPS)/Toll-Like Receptor 4 (TLR4) Signalling

Florent Cochet et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2017)

Review Biochemistry & Molecular Biology

Targeting of microbe-derived metabolites to improve human health: The next frontier for drug discovery

J. Mark Brown et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2017)

Article Biochemistry & Molecular Biology

Lipooligosaccharide Structures of Invasive and Carrier Isolates of Neisseria meningitidis Are Correlated with Pathogenicity and Carriage

Constance M. John et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2016)

Article Biochemistry & Molecular Biology

Variation in Microbiome LPS Immunogenicity Contributes to Autoimmunity in Humans

Tommi Vatanen et al.

Review Immunology

Sensing Gram-negative bacteria: a phylogenetic perspective

Claudine Neyen et al.

CURRENT OPINION IN IMMUNOLOGY (2016)

Article Multidisciplinary Sciences

Culturing of 'unculturable' human microbiota reveals novel taxa and extensive sporulation

Hilary P. Browne et al.

NATURE (2016)

Article Biochemistry & Molecular Biology

Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees

Ivica Letunic et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Multidisciplinary Sciences

A secreted bacterial peptidoglycan hydrolase enhances tolerance to enteric pathogens

Kavita J. Rangan et al.

SCIENCE (2016)

Article Multidisciplinary Sciences

Functional metagenomic discovery of bacterial effectors in the human microbiome and isolation of commendamide, a GPCR G2A/132 agonist

Louis J. Cohen et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Review Immunology

NOD1 and NOD2: Signaling, Host Defense, and Inflammatory Disease

Roberta Caruso et al.

IMMUNITY (2014)

Article Biotechnology & Applied Microbiology

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love et al.

GENOME BIOLOGY (2014)

Review Microbiology

Bacterial interference with canonical NFκB signalling

Mona Johannessen et al.

MICROBIOLOGY-SGM (2013)

Article Multidisciplinary Sciences

Neisseria gonorrhoeae-derived heptose elicits an innate immune response and drives HIV-1 expression

Rebecca J. Malott et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Infectious Diseases

Microbial culturomics: paradigm shift in the human gut microbiome study

J. -C. Lagier et al.

CLINICAL MICROBIOLOGY AND INFECTION (2012)

Article Biochemical Research Methods

Fast gapped-read alignment with Bowtie 2

Ben Langmead et al.

NATURE METHODS (2012)

Article Medicine, General & Internal

Prosthetic Valve Endocarditis Caused by Gemella sanguinis: A Consequence of Persistent Dental Infection

Prashant Gundre et al.

AMERICAN JOURNAL OF THE MEDICAL SCIENCES (2011)

Article Biochemistry & Molecular Biology

HMMER web server: interactive sequence similarity searching

Robert D. Finn et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Multidisciplinary Sciences

Extensive personal human gut microbiota culture collections characterized and manipulated in gnotobiotic mice

Andrew L. Goodman et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Biochemistry & Molecular Biology

Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes

Lena Tasse et al.

GENOME RESEARCH (2010)

Article Biochemistry & Molecular Biology

Ab initio gene identification in metagenomic sequences

Wenhan Zhu et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biochemistry & Molecular Biology

Natural Products from Environmental DNA Hosted in Ralstonia metallidurans

Jeffrey W. Craig et al.

ACS CHEMICAL BIOLOGY (2009)

Article Gastroenterology & Hepatology

Nuclear factor-kappa B in Intestinal protection and destruction

Martina E. Spehlmann et al.

CURRENT OPINION IN GASTROENTEROLOGY (2009)

Review Microbiology

Control of bacterial transcription, translation and replication by (p)ppGpp

Anjana Srivatsan et al.

CURRENT OPINION IN MICROBIOLOGY (2008)

Article Biochemistry & Molecular Biology

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

A. Dereeper et al.

NUCLEIC ACIDS RESEARCH (2008)

Review Microbiology

Multidrug-resistance efflux pumps - not just for resistance

Laura J. V. Piddock

NATURE REVIEWS MICROBIOLOGY (2006)

Article Evolutionary Biology

Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative

Maria Anisimova et al.

SYSTEMATIC BIOLOGY (2006)

Article Biochemistry & Molecular Biology

MUSCLE: multiple sequence alignment with high accuracy and high throughput

RC Edgar

NUCLEIC ACIDS RESEARCH (2004)

Article Microbiology

Quantifying the accessibility of the metagenome by random expression cloning techniques

EM Gabor et al.

ENVIRONMENTAL MICROBIOLOGY (2004)

Article Biochemistry & Molecular Biology

Nod2 is a general sensor of peptidoglycan through muramyl dipeptide (MDP) detection

SE Girardin et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2003)

Article Biochemistry & Molecular Biology

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

J Castresana

MOLECULAR BIOLOGY AND EVOLUTION (2000)