4.8 Article

UCSC Genome Browser enters 20th year

期刊

NUCLEIC ACIDS RESEARCH
卷 48, 期 D1, 页码 D756-D761

出版社

OXFORD UNIV PRESS
DOI: 10.1093/nar/gkz1012

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资金

  1. National Human Genome Research Institute [5U41HG002371, 2U41HG007234]
  2. National Institute of Mental Health, National Institutes of Health [5U01MH114825]
  3. California Institute for Regenerative Medicine [GC1R-06673-C]
  4. Howard Hughes Medical Institute [090100]
  5. Regeneron [CBJCHBCAABAA -nBGXMxFrE0WG7VvHOtm8RAzv674WMNt]
  6. St. Baldricks Foundation [427053]
  7. Silicon Valley Community Foundation [2018-182809, 2017-171519, 2018-194093]

向作者/读者索取更多资源

The University of California Santa Cruz Genome Browser website (https://genome.ucsc.edu) enters its 20th year of providing high-quality genomics data visualization and genome annotations to the research community. In the past year, we have added a new option to our web BLAT tool that allows search against all genomes, a single-cell expression viewer (https://cells.ucsc.edu), a 'lollipop' plot display mode for high-density variation data, a RESTful API for data extraction and a custom-track backup feature. New datasets include Tabula Muris single-cell expression data, GeneHancer regulatory annotations, The Cancer Genome Atlas Pan-Cancer variants, Genome Reference Consortium Patch sequences, new ENCODE transcription factor binding site peaks and clusters, the Database of Genomic Variants Gold Standard Variants, Genomenon Mastermind variants and three new multi-species alignment tracks.

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