4.6 Article

Notes, outline and divergence times of Basidiomycota

期刊

FUNGAL DIVERSITY
卷 99, 期 1, 页码 105-367

出版社

SPRINGER
DOI: 10.1007/s13225-019-00435-4

关键词

Classification; Molecular clock; Fungi; Systematics; Taxonomy

类别

资金

  1. National Key R&D Program of China [2018YFD0400200]
  2. National Natural Science Foundation of China [31470152, 31360014, 31970010, 31270072, 30770013, 31500013]
  3. Beijing Innovative Consortium of Agriculture Research System [BAIC05-2019]
  4. Thailand Research funds [RDG6130001]
  5. Thailand Science Research and Innovation fund [DBG6280009]
  6. Croatian Science Foundation under the project ForFungiDNA [IP-2018-01-1736]
  7. Moravian Museum by the Ministry of Culture of the Czech Republic as part of its long-term conceptual development programme for research institutions [MK000094862]
  8. Special Funds for the Young Scholars of Taxonomy of the Chinese Academy of Sciences [ZSBR-001]
  9. National Key Basic Research Special Foundation of China [2013FY110400]
  10. Department of Science & Technology (DST), New Delhi, India [DST/INSPIRE/04/2018/001906]
  11. V.L. Komarov Botanical Institute of the Russian Academy of Sciences [AAAA-A19-119080990059-1]
  12. V.L. Komarov Botanical Institute of the Russian Academy of Sciences (RFBR) [19-0400024]
  13. National Project on Scientific Ground work for Basic Science of the Ministry of Science and Technology [2012FY111600 2014FY210400]
  14. Coordenacao de Aperfeicoamento de Pessoal de Nivel Superior (CAPES-Brazil)
  15. CNPq [307922/2014-6, 307947/2017-3]
  16. CONACYT [252934]
  17. COFAA
  18. IPN [SIP-20195222]
  19. National Park Service
  20. Boston Harbor Now
  21. New England Botanical Club (2017 Les Mehrhoff Botanical Research Award)
  22. Iranian Research Organization for Science and Technology [1012196004]
  23. ELTE Institutional Excellence Program of the Hungarian Ministry of Human Capacities [1783-3/2018/FEKUTSRAT]

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The Basidiomycota constitutes a major phylum of the kingdom Fungi and is second in species numbers to the Ascomycota. The present work provides an overview of all validly published, currently used basidiomycete genera to date in a single document. An outline of all genera of Basidiomycota is provided, which includes 1928 currently used genera names, with 1263 synonyms, which are distributed in 241 families, 68 orders, 18 classes and four subphyla. We provide brief notes for each accepted genus including information on classification, number of accepted species, type species, life mode, habitat, distribution, and sequence information. Furthermore, three phylogenetic analyses with combined LSU, SSU, 5.8s, rpb1, rpb2, and ef1 datasets for the subphyla Agaricomycotina, Pucciniomycotina and Ustilaginomycotina are conducted, respectively. Divergence time estimates are provided to the family level with 632 species from 62 orders, 168 families and 605 genera. Our study indicates that the divergence times of the subphyla in Basidiomycota are 406-430 Mya, classes are 211-383 Mya, and orders are 99-323 Mya, which are largely consistent with previous studies. In this study, all phylogenetically supported families were dated, with the families of Agaricomycotina diverging from 27-178 Mya, Pucciniomycotina from 85-222 Mya, and Ustilaginomycotina from 79-177 Mya. Divergence times as additional criterion in ranking provide additional evidence to resolve taxonomic problems in the Basidiomycota taxonomic system, and also provide a better understanding of theirphylogeny and evolution.

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