4.6 Review

A guide to phylogenetic metrics for conservation, community ecology and macroecology

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemical Research Methods

pez: phylogenetics for the environmental sciences

William D. Pearse et al.

BIOINFORMATICS (2015)

Article Ecology

A new dynamic null model for phylogenetic community structure

Alex L. Pigot et al.

ECOLOGY LETTERS (2015)

Article Biochemistry & Molecular Biology

Global Distribution and Conservation of Evolutionary Distinctness in Birds

Walter Jetz et al.

CURRENT BIOLOGY (2014)

Article Biodiversity Conservation

Phylogenetic trees do not reliably predict feature diversity

Steven Kelly et al.

DIVERSITY AND DISTRIBUTIONS (2014)

Article Ecology

New biodiversity measure that includes consistent interspecific and intraspecific components

Sandrine Pavoine et al.

METHODS IN ECOLOGY AND EVOLUTION (2014)

Article Ecology

Functional and phylogenetic similarity among communities

Sandrine Pavoine et al.

METHODS IN ECOLOGY AND EVOLUTION (2014)

Article Biodiversity Conservation

Unifying measures of biodiversity: understanding when richness and phylogenetic diversity should be congruent

Caroline M. Tucker et al.

DIVERSITY AND DISTRIBUTIONS (2013)

Article Multidisciplinary Sciences

Experimental evidence that evolutionarily diverse assemblages result in higher productivity

Marc W. Cadotte

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Letter Ecology

Nurturing the use of evolutionary diversity in nature conservation

Dan F. Rosauer et al.

TRENDS IN ECOLOGY & EVOLUTION (2013)

Article Ecology

Phylogenetic diversity and nature conservation: where are we?

Marten Winter et al.

TRENDS IN ECOLOGY & EVOLUTION (2013)

Review Biology

Ecophylogenetics: advances and perspectives

Nicolas Mouquet et al.

BIOLOGICAL REVIEWS (2012)

Article Biodiversity Conservation

Incorporating Geographical and Evolutionary Rarity into Conservation Prioritization

Caroline M. Tucker et al.

CONSERVATION BIOLOGY (2012)

Review Biodiversity Conservation

What's on the horizon for macroecology?

Jan Beck et al.

ECOGRAPHY (2012)

Article Ecology

Measuring diversity: the importance of species similarity

Tom Leinster et al.

ECOLOGY (2012)

Article Ecology

Phylogenetic diversity and the functioning of ecosystems

Diane S. Srivastava et al.

ECOLOGY LETTERS (2012)

Article Ecology

Global patterns of amphibian phylogenetic diversity

Susanne A. Fritz et al.

JOURNAL OF BIOGEOGRAPHY (2012)

Article Multidisciplinary Sciences

The global diversity of birds in space and time

W. Jetz et al.

NATURE (2012)

Article Biology

Decomposing phylogenetic entropy into α, β and γ components

Maud A. Mouchet et al.

BIOLOGY LETTERS (2011)

Article Ecology

Phylogenetic limiting similarity and competitive exclusion

Cyrille Violle et al.

ECOLOGY LETTERS (2011)

Article Multidisciplinary Sciences

Consequences of climate change on the tree of life in Europe

Wilfried Thuiller et al.

NATURE (2011)

Article Biology

The shape of mammalian phylogeny: patterns, processes and scales

Andy Purvis et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2011)

Article Biology

Phylogenetic diversity as a window into the evolutionary and biogeographic histories of present-day richness gradients for mammals

T. Jonathan Davies et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2011)

Article Biology

Complete, accurate, mammalian phylogenies aid conservation planning, but not much

Ana S. L. Rodrigues et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2011)

Article Ecology

Phylogenetic Metrics of Community Similarity

Anthony R. Ives et al.

AMERICAN NATURALIST (2010)

Article Biochemical Research Methods

Picante: R tools for integrating phylogenies and ecology

Steven W. Kembel et al.

BIOINFORMATICS (2010)

Article Biology

Evolution of climate niches in European mammals?

Carsten F. Dormann et al.

BIOLOGY LETTERS (2010)

Article Ecology

Communities contain closely related species during ecosystem disturbance

Matthew R. Helmus et al.

ECOLOGY LETTERS (2010)

Article Plant Sciences

Resemblance in phylogenetic diversity among ecological assemblages

David A. Nipperess et al.

JOURNAL OF VEGETATION SCIENCE (2010)

Article Biology

Phylogenetic diversity measures based on Hill numbers

Anne Chao et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2010)

Review Ecology

The merging of community ecology and phylogenetic biology

Jeannine Cavender-Bares et al.

ECOLOGY LETTERS (2009)

Article Biochemistry & Molecular Biology

Phylogenetic endemism: a new approach for identifying geographical concentrations of evolutionary history

Dan Rosauer et al.

MOLECULAR ECOLOGY (2009)

Article Multidisciplinary Sciences

Conservatism and diversification of plant functional traits: Evolutionary rates versus phylogenetic signal

David Ackerly

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Multidisciplinary Sciences

Plant extinctions and introductions lead to phylogenetic and taxonomic homogenization of the European flora

Marten Winter et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Review Ecology

Phylogenetic Approaches to the Study of Extinction

Andy Purvis

ANNUAL REVIEW OF ECOLOGY EVOLUTION AND SYSTEMATICS (2008)

Article Biochemical Research Methods

Phylocom: software for the analysis of phylogenetic community structure and trait evolution

Campbell O. Webb et al.

BIOINFORMATICS (2008)

Article Evolutionary Biology

Phylogenetic diversity: a quantitative framework for measurement of priority and achievement in biodiversity conservation

GARY M. BARKER

BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY (2008)

Editorial Material Plant Sciences

Interpreting and estimating measures of community phylogenetic structuring

Olivier J. Hardy et al.

JOURNAL OF ECOLOGY (2008)

Article Ecology

A comparative test of phylogenetic diversity indices

Oliver Schweiger et al.

OECOLOGIA (2008)

Article Multidisciplinary Sciences

Microbes on mountainsides: Contrasting elevational patterns of bacterial and plant diversity

Jessica A. Bryant et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Multidisciplinary Sciences

Functional traits and niche-based tree community assembly in an amazonian forest

Nathan J. B. Kraft et al.

SCIENCE (2008)

Article Biochemical Research Methods

GEIGER: investigating evolutionary radiations

Luke J. Harmon et al.

BIOINFORMATICS (2008)

Article Multidisciplinary Sciences

The latitudinal gradient in recent speciation and extinction rates of birds and mammals

Jason T. Weir et al.

SCIENCE (2007)

Article Multidisciplinary Sciences

Mammals on the EDGE: Conservation Priorities Based on Threat and Phylogeny

Nick J. B. Isaac et al.

PLOS ONE (2007)

Article Ecology

Phylogenetic measures of biodiversity

Matthew R. Helmus et al.

AMERICAN NATURALIST (2007)

Article Mathematical & Computational Biology

A semantic taxonomy for diversity measures

Carlo Ricotta

ACTA BIOTHEORETICA (2007)

Article Multidisciplinary Sciences

Preserving the evolutionary potential of floras in biodiversity hotspots

Felix Forest et al.

NATURE (2007)

Article Biotechnology & Applied Microbiology

Quantitative and qualitative beta diversity measures lead to different insights into factors that structure microbial communities

Catherine A. Lozupone et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)

Article Biotechnology & Applied Microbiology

UniFrac: a new phylogenetic method for comparing microbial communities

C Lozupone et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)

Article Biochemical Research Methods

APE: Analyses of Phylogenetics and Evolution in R language

E Paradis et al.

BIOINFORMATICS (2004)

Review Ecology

Historical biogeography, ecology and species richness

JJ Wiens et al.

TRENDS IN ECOLOGY & EVOLUTION (2004)

Article Environmental Sciences

Quadratic diversity:: Its maximization can reduce the richness of species

J Izsák et al.

ENVIRONMENTAL AND ECOLOGICAL STATISTICS (2002)

Review Ecology

Phylogenetic analysis and comparative data: A test and review of evidence

RP Freckleton et al.

AMERICAN NATURALIST (2002)

Article Biology

Testing macro-evolutionary models using incomplete molecular phylogenies

OG Pybus et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2000)

Article Multidisciplinary Sciences

Nonrandom extinction and the loss of evolutionary history

A Purvis et al.

SCIENCE (2000)