相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Historical Genomes Reveal the Genomic Consequences of Recent Population Decline in Eastern Gorillas
Tom van der Valk et al.
CURRENT BIOLOGY (2019)
Selective single molecule sequencing and assembly of a human Y chromosome of African origin
Lukas F. K. Kuderna et al.
NATURE COMMUNICATIONS (2019)
ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees
Chao Zhang et al.
BMC BIOINFORMATICS (2018)
MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
Sudhir Kumar et al.
MOLECULAR BIOLOGY AND EVOLUTION (2018)
Natural selection interacts with recombination to shape the evolution of hybrid genomes
Molly Schumer et al.
SCIENCE (2018)
Using Phylogenomic Data to Explore the Effects of Relaxed Clocks and Calibration Strategies on Divergence Time Estimation: Primates as a Test Case
Mario Dos Reis et al.
SYSTEMATIC BIOLOGY (2018)
NOVOPlasty: de novo assembly of organelle genomes from whole genome data
Nicolas Dierckxsens et al.
NUCLEIC ACIDS RESEARCH (2017)
Direct estimate of the spontaneous germ line mutation rate in African green monkeys
Susanne P. Pfeifer
EVOLUTION (2017)
Exploring Evolutionary Relationships Across the Genome Using Topology Weighting
Simon H. Martin et al.
GENETICS (2017)
Introgression Makes Waves in Inferred Histories of Effective Population Size
John Hawks
HUMAN BIOLOGY (2017)
Ancient hybridization and strong adaptation to viruses across African vervet monkey populations
Hannes Svardal et al.
NATURE GENETICS (2017)
Y and W Chromosome Assemblies: Approaches and Discoveries
Marta Tomaszkiewicz et al.
TRENDS IN GENETICS (2017)
Exploring Evolutionary Relationships Across the Genome Using Topology Weighting
Simon H. Martin et al.
GENETICS (2017)
The population genomics of rhesus macaques (Macaca mulatta) based on whole-genome sequences
Cheng Xue et al.
GENOME RESEARCH (2016)
Fast Coalescent-Based Computation of Local Branch Support from Quartet Frequencies
Erfan Sayyari et al.
MOLECULAR BIOLOGY AND EVOLUTION (2016)
PSMC analysis of effective population sizes in molecular ecology and its application to black-and-white Ficedula flycatchers
Krystyna Nadachowska-Brzyska et al.
MOLECULAR ECOLOGY (2016)
Ancient gene flow from early modern humans into Eastern Neanderthals
Martin Kuhlwilm et al.
NATURE (2016)
Inferring species divergence times using pairwise sequential Markovian coalescent modelling and low-coverage genomic data
James A. Cahill et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2016)
Chimpanzee genomic diversity reveals ancient admixture with bonobos
Marc de Manuel et al.
SCIENCE (2016)
The Ensembl Variant Effect Predictor
William McLaren et al.
GENOME BIOLOGY (2016)
The genome of the vervet (Chlorocebus aethiops sabaeus)
Wesley C. Warren et al.
GENOME RESEARCH (2015)
SEPT12 orchestrates the formation of mammalian sperm annulus by organizing core octameric complexes with other SEPT proteins
Yung-Che Kuo et al.
JOURNAL OF CELL SCIENCE (2015)
Mountain gorilla genomes reveal the impact of long-term population decline and inbreeding
Yali Xue et al.
SCIENCE (2015)
Evaluating the Use of ABBA-BABA Statistics to Locate Introgressed Loci
Simon H. Martin et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
ANGSD: Analysis of Next Generation Sequencing Data
Thorfinn Sand Korneliussen et al.
BMC BIOINFORMATICS (2014)
The genomic landscape of Neanderthal ancestry in present-day humans
Sriram Sankararaman et al.
NATURE (2014)
Neurocysticercosis: the effectiveness of the cysticidal treatment could be influenced by the host immunity
Graciela Cardenas et al.
MEDICAL MICROBIOLOGY AND IMMUNOLOGY (2014)
Distinct and Diverse: Range-Wide Phylogeography Reveals Ancient Lineages and High Genetic Variation in the Endangered Okapi (Okapia johnstoni)
David W. G. Stanton et al.
PLOS ONE (2014)
Haplotype Estimation Using Sequencing Reads
Olivier Delaneau et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2013)
Mitochondrial Diversity and Distribution of African Green Monkeys (Chlorocebus Gray, 1870)
Tanja Haus et al.
AMERICAN JOURNAL OF PRIMATOLOGY (2013)
Quantifying Population Genetic Differentiation from Next-Generation Sequencing Data
Matteo Fumagalli et al.
GENETICS (2013)
Assessing the Effect of Sequencing Depth and Sample Size in Population Genetics Inferences
Matteo Fumagalli
PLOS ONE (2013)
Next-Generation Museomics Disentangles One of the Largest Primate Radiations
Katerina Guschanski et al.
SYSTEMATIC BIOLOGY (2013)
Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data
Joseph K. Pickrell et al.
PLOS GENETICS (2012)
phangorn: phylogenetic analysis in R
Klaus Peter Schliep
BIOINFORMATICS (2011)
The variant call format and VCFtools
Petr Danecek et al.
BIOINFORMATICS (2011)
PHAST and RPHAST: phylogenetic analysis with space/time models
Melissa J. Hubisz et al.
BRIEFINGS IN BIOINFORMATICS (2011)
Approximate Likelihood Calculation on a Phylogeny for Bayesian Estimation of Divergence Times
Mario dos Reis et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
Fabian Sievers et al.
MOLECULAR SYSTEMS BIOLOGY (2011)
Inference of human population history from individual whole-genome sequences
Heng Li et al.
NATURE (2011)
A framework for variation discovery and genotyping using next-generation DNA sequencing data
Mark A. DePristo et al.
NATURE GENETICS (2011)
Population differentiation as a test for selective sweeps
Hua Chen et al.
GENOME RESEARCH (2010)
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
Aaron McKenna et al.
GENOME RESEARCH (2010)
FastTree 2-Approximately Maximum-Likelihood Trees for Large Alignments
Morgan N. Price et al.
PLOS ONE (2010)
A Draft Sequence of the Neandertal Genome
Richard E. Green et al.
SCIENCE (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
AEBP2 as a potential targeting protein for Polycomb Repression Complex PRC2
Hana Kim et al.
NUCLEIC ACIDS RESEARCH (2009)
Subdivision in an ancestral species creates asymmetry in gene trees
Montgomery Slatkin et al.
MOLECULAR BIOLOGY AND EVOLUTION (2008)
High-throughput functional annotation and data mining with the Blast2GO suite
Stefan Gotz et al.
NUCLEIC ACIDS RESEARCH (2008)
PLINK: A tool set for whole-genome association and population-based linkage analyses
Shaun Purcell et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2007)
PAML 4: Phylogenetic analysis by maximum likelihood
Ziheng Yang
MOLECULAR BIOLOGY AND EVOLUTION (2007)
Application of phylogenetic networks in evolutionary studies
DH Huson et al.
MOLECULAR BIOLOGY AND EVOLUTION (2006)
A proposed drainage evolution model for Central Africa - Did the Congo flow east?
J Stankiewicz et al.
JOURNAL OF AFRICAN EARTH SCIENCES (2006)
APE: Analyses of Phylogenetics and Evolution in R language
E Paradis et al.
BIOINFORMATICS (2004)
Rivers influence the population genetic structure of bonobos (Pan paniscus)
J Eriksson et al.
MOLECULAR ECOLOGY (2004)
Assessment of the diversity of African primates
P Grubb et al.
INTERNATIONAL JOURNAL OF PRIMATOLOGY (2003)
AIP1/ALIX is a binding partner for HIV-1 p6 and EIAV p9 functioning in virus budding
B Strack et al.
CELL (2003)
The protein network of HIV budding
UK von Schwedler et al.
CELL (2003)
A bimolecular mechanism of HIV-1 Tat protein interaction with RNA polymerase II transcription elongation complexes
C Zhou et al.
JOURNAL OF MOLECULAR BIOLOGY (2002)
分享论文
