相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Performance of Microbiome Sequence Inference Methods in Environments with Varying Biomass
Vincent Caruso et al.
MSYSTEMS (2019)
Towards precision quantification of contamination in metagenomic sequencing experiments
M. S. Zinter et al.
MICROBIOME (2019)
KatharoSeq Enables High-Throughput Microbiome Analysis from Low-Biomass Samples
Jeremiah J. Minich et al.
MSYSTEMS (2018)
Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data
Nicole M. Davis et al.
MICROBIOME (2018)
Exact sequence variants should replace operational taxonomic units in marker-gene data analysis
Benjamin J. Callahan et al.
ISME JOURNAL (2017)
The Microbiome and the Respiratory Tract
Robert P. Dickson et al.
ANNUAL REVIEW OF PHYSIOLOGY, VOL 78 (2016)
A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling
Rosalinda D'Amore et al.
BMC GENOMICS (2016)
Quality filtering of Illumina index reads mitigates sample cross-talk
Erik Scott Wright et al.
BMC GENOMICS (2016)
Decontamination of 16S rRNA gene amplicon sequence datasets based on bacterial load assessment by qPCR
Vladimir Lazarevic et al.
BMC MICROBIOLOGY (2016)
DADA2: High-resolution sample inference from Illumina amplicon data
Benjamin J. Callahan et al.
NATURE METHODS (2016)
Inherent bacterial DNA contamination of extraction and sequencing reagents may affect interpretation of microbiota in low bacterial biomass samples
Angela Glassing et al.
GUT PATHOGENS (2016)
Does the Urinary Microbiome Play a Role in Urgency Urinary Incontinence and Its Severity?
Lisa Karstens et al.
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2016)
mockrobiota: a Public Resource for Microbiome Bioinformatics Benchmarking
Nicholas A. Bokulich et al.
MSYSTEMS (2016)
The new world of the urinary microbiota in women
Linda Brubaker et al.
AMERICAN JOURNAL OF OBSTETRICS AND GYNECOLOGY (2015)
The female urinary microbiome in urgency urinary incontinence
Meghan M. Pearce et al.
AMERICAN JOURNAL OF OBSTETRICS AND GYNECOLOGY (2015)
Microbiota of the indoor environment: a meta-analysis
Rachel I. Adams et al.
MICROBIOME (2015)
Collection media and delayed freezing effects on microbial composition of human stool
Roberto Flores et al.
MICROBIOME (2015)
Deriving accurate microbiota profiles from human samples with low bacterial content through post-sequencing processing of Illumina MiSeq data
Jake Jervis-Bardy et al.
MICROBIOME (2015)
The microbiome of the human lower airways: a next generation sequencing perspective
Velma T. E. Aho et al.
WORLD ALLERGY ORGANIZATION JOURNAL (2015)
Interpreting 16S metagenomic data without clustering to achieve sub-OTU resolution
Mikhail Tikhonov et al.
ISME JOURNAL (2015)
Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
Susannah J. Salter et al.
BMC BIOLOGY (2014)
Diverse and Widespread Contamination Evident in the Unmapped Depths of High Throughput Sequencing Data
Richard W. Lusk
PLOS ONE (2014)
Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible
Paul J. McMurdie et al.
PLOS COMPUTATIONAL BIOLOGY (2014)
Improved characterization of medically relevant fungi in the human respiratory tract using next-generation sequencing
Kyle Bittinger et al.
GENOME BIOLOGY (2014)
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
Paul J. McMurdie et al.
PLOS ONE (2013)
Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
J. Gregory Caporaso et al.
ISME JOURNAL (2012)
Comparison of DNA Extraction Methods for Microbial Community Profiling with an Application to Pediatric Bronchoalveolar Lavage Samples
Dana Willner et al.
PLOS ONE (2012)
Bayesian community-wide culture-independent microbial source tracking
Dan Knights et al.
NATURE METHODS (2011)
An Efficient Multistrategy DNA Decontamination Procedure of PCR Reagents for Hypersensitive PCR Applications
Sophie Champlot et al.
PLOS ONE (2010)
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
Qiong Wang et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
分享论文
