相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Fine-Grained Analysis of Spontaneous Mutation Spectrum and Frequency in Arabidopsis thaliana
Mao-Lun Weng et al.
GENETICS (2019)
Minimap2: pairwise alignment for nucleotide sequences
Heng Li
BIOINFORMATICS (2018)
Rice H2A.Z negatively regulates genes responsive to nutrient starvation but promotes expression of key housekeeping genes
Sara Zahraeifard et al.
JOURNAL OF EXPERIMENTAL BOTANY (2018)
Histone H2A variants confer specific properties to nucleosomes and impact on chromatin accessibility
Akihisa Osakabe et al.
NUCLEIC ACIDS RESEARCH (2018)
Regulatory activities of transposable elements: from conflicts to benefits
Edward B. Chuong et al.
NATURE REVIEWS GENETICS (2017)
Integration site selection by retroviruses and transposable elements in eukaryotes
Tania Sultana et al.
NATURE REVIEWS GENETICS (2017)
Transposable Element Domestication As an Adaptation to Evolutionary Conflicts
Diwash Jangam et al.
TRENDS IN GENETICS (2017)
DDM1 and Lsh remodelers allow methylation of DNA wrapped in nucleosomes
David B. Lyons et al.
ELIFE (2017)
Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions
Taiji Kawakatsu et al.
CELL (2016)
Regulatory evolution of innate immunity through co-option of endogenous retroviruses
Edward B. Chuong et al.
SCIENCE (2016)
The Arabidopsis thaliana mobilome and its impact at the species level
Leandro Quadrana et al.
ELIFE (2016)
H2A.Z marks antisense promoters and has positive effects on antisense transcript levels in budding yeast
Muxin Gu et al.
BMC GENOMICS (2015)
Characteristics of Plant Essential Genes Allow for within-and between-Species Prediction of Lethal Mutant Phenotypes
John P. Lloyd et al.
PLANT CELL (2015)
Environmental perception and epigenetic memory: mechanistic insight through FLC
Scott Berry et al.
PLANT JOURNAL (2015)
Genome-Wide Negative Feedback Drives Transgenerational DNA Methylation Dynamics in Arabidopsis
Tasuku Ito et al.
PLOS GENETICS (2015)
Aphid-repellent pheromone E-β-farnesene is generated in transgenic Arabidopsis thaliana over-expressing farnesyl diphosphate synthase2
Varnika Bhatia et al.
ANNALS OF BOTANY (2015)
TE-Tracker: systematic identification of transposition events through whole-genome resequencing
Arthur Gilly et al.
BMC BIOINFORMATICS (2014)
The Histone Variant H2A. W Defines Heterochromatin and Promotes Chromatin Condensation in Arabidopsis
Ramesh Yelagandula et al.
CELL (2014)
Multiple FLC haplotypes defined by independent cis-regulatory variation underpin life history diversity in Arabidopsis thaliana
Peijin Li et al.
GENES & DEVELOPMENT (2014)
Nectar secretion requires sucrose phosphate synthases and the sugar transporter SWEET9
I. Winnie Lin et al.
NATURE (2014)
The Functional Topography of the Arabidopsis Genome Is Organized in a Reduced Number of Linear Motifs of Chromatin States
Joana Sequeira-Mendes et al.
PLANT CELL (2014)
ISWI proteins participate in the genome-wide nucleosome distribution in Arabidopsis
Guang Li et al.
PLANT JOURNAL (2014)
Precise estimates of mutation rate and spectrum in yeast
Yuan O. Zhu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Mapping the Epigenetic Basis of Complex Traits
Sandra Cortijo et al.
SCIENCE (2014)
Mapping and Dynamics of Regulatory DNA and Transcription Factor Networks in A-thaliana
Alessandra M. Sullivan et al.
CELL REPORTS (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
Mobilization of a plant transposon by expression of the transposon-encoded anti-silencing factor
Yu Fu et al.
EMBO JOURNAL (2013)
Reconstructing de novo silencing of an active plant retrotransposon
Arturo Mari-Ordonez et al.
NATURE GENETICS (2013)
How important are transposons for plant evolution?
Damon Lisch
NATURE REVIEWS GENETICS (2013)
Active Transposition in Genomes
Cheng Ran Lisa Huang et al.
ANNUAL REVIEW OF GENETICS, VOL 46 (2012)
Centromere-targeted de novo integrations of an LTR retrotransposon of Arabidopsis lyrata
Sayuri Tsukahara et al.
GENES & DEVELOPMENT (2012)
Retrotransposon Ty1 integration targets specifically positioned asymmetric nucleosomal DNA segments in tRNA hotspots
Loris Mularoni et al.
GENOME RESEARCH (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Features of the Arabidopsis recombination landscape resulting from the combined loss of sequence variation and DNA methylation
Maria Colome-Tatche et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Quantitative Modulation of Polycomb Silencing Underlies Natural Variation in Vernalization
Vincent Coustham et al.
SCIENCE (2012)
Deposition of Histone Variant H2A.Z within Gene Bodies Regulates Responsive Genes
Devin Coleman-Derr et al.
PLOS GENETICS (2012)
An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress
Hidetaka Ito et al.
NATURE (2011)
The Rate and Molecular Spectrum of Spontaneous Mutations in Arabidopsis thaliana
Stephan Ossowski et al.
SCIENCE (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Analysis of the genome sequences of three Drosophila melanogaster spontaneous mutation accumulation lines
Peter D. Keightley et al.
GENOME RESEARCH (2009)
Selective epigenetic control of retrotransposition in Arabidopsis
Marie Mirouze et al.
NATURE (2009)
A genome-wide view of Caenorhabditis elegans base-substitution mutation processes
Dee R. Denver et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Assessing the Impact of Transgenerational Epigenetic Variation on Complex Traits
Frank Johannes et al.
PLOS GENETICS (2009)
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
Daniel R. Zerbino et al.
GENOME RESEARCH (2008)
Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks
Daniel Zilberman et al.
NATURE (2008)
H2A.Z: View from the top
Jordanka Zlatanova et al.
STRUCTURE (2008)
Histone H2A.Z and homologues of components of the SWR1 complex are required to control immunity in Arabidopsis
Rosana March-Diaz et al.
PLANT JOURNAL (2008)
A unified classification system for eukaryotic transposable elements
Thomas Wicker et al.
NATURE REVIEWS GENETICS (2007)
Transposable elements and the epigenetic regulation of the genome
R. Keith Slotkin et al.
NATURE REVIEWS GENETICS (2007)
Role of transposable elements in heterochromatin and epigenetic control
Z Lippman et al.
NATURE (2004)
Flower visitors in a natural population of Arabidopsis thaliana
MH Hoffmann et al.
PLANT BIOLOGY (2003)
Target site specificity of the Tos17 retrotransposon shows a preference for insertion within genes and against insertion in retrotransposon-rich regions of the genome
A Miyao et al.
PLANT CELL (2003)
DNA methylation controls histone H3 lysine 9 methylation and heterochromatin assembly in Arabidopsis
WJJ Soppe et al.
EMBO JOURNAL (2002)
The evolution of disease resistance genes
TE Richter et al.
PLANT MOLECULAR BIOLOGY (2000)