相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Cistrome Data Browser: expanded datasets and new tools for gene regulatory analysis
Rongbin Zheng et al.
NUCLEIC ACIDS RESEARCH (2019)
AMPK: guardian of metabolism and mitochondrial homeostasis
Sebastien Herzig et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2018)
AMPK in skeletal muscle function and metabolism
Rasmus Kjobsted et al.
FASEB JOURNAL (2018)
Pioneer factor Pax7 deploys a stable enhancer repertoire for specification of cell fate
Alexandre Mayran et al.
NATURE GENETICS (2018)
TFmapper: A Tool for Searching Putative Factors Regulating Gene Expression Using ChIP-seq Data
Jianming Zeng et al.
INTERNATIONAL JOURNAL OF BIOLOGICAL SCIENCES (2018)
Glucose-regulated phosphorylation of TET2 by AMPK reveals a pathway linking diabetes to cancer
Di Wu et al.
NATURE (2018)
A robust Pax7EGFP mouse that enables the visualization of dynamic behaviors of muscle stem cells
Elisia D. Tichy et al.
SKELETAL MUSCLE (2018)
Dynamic DNA methylation: In the right place at the right time
Chongyuan Luo et al.
SCIENCE (2018)
Cistrome Data Browser: a data portal for ChIP-Seq and chromatin accessibility data in human and mouse
Shenglin Mei et al.
NUCLEIC ACIDS RESEARCH (2017)
AMPK: Mechanisms of Cellular Energy Sensing and Restoration of Metabolic Balance
Daniel Garcia et al.
MOLECULAR CELL (2017)
Acetylation Enhances TET2 Function in Protecting against Abnormal DNA Methylation during Oxidative Stress
Yang W. Zhang et al.
MOLECULAR CELL (2017)
Pax7 remodels the chromatin landscape in skeletal muscle stem cells
Karin C. Lilja et al.
PLOS ONE (2017)
Ten-Eleven Translocation-2 (Tet2) Is Involved in Myogenic Differentiation of Skeletal Myoblast Cells in Vitro
Xia Zhong et al.
SCIENTIFIC REPORTS (2017)
AMPKα1-LDH pathway regulates muscle stem cell self-renewal by controlling metabolic homeostasis
Marine Theret et al.
EMBO JOURNAL (2017)
Muscle cell identity requires Pax7-mediated lineage-specific DNA demethylation
Elvira Carrio et al.
BMC BIOLOGY (2016)
AMPK governs lineage specification through Tfeb-dependent regulation of lysosomes
Nathan P. Young et al.
GENES & DEVELOPMENT (2016)
Cooperative Action between SALL4A and TET Proteins in Stepwise Oxidation of 5-Methylcytosine
Jun Xiong et al.
MOLECULAR CELL (2016)
Interplay between Metabolism and Epigenetics: A Nuclear Adaptation to Environmental Changes
Jean-Pierre Etchegaray et al.
MOLECULAR CELL (2016)
deepTools2: a next generation web server for deep-sequencing data analysis
Fidel Ramirez et al.
NUCLEIC ACIDS RESEARCH (2016)
AMPK: An Energy-Sensing Pathway with Multiple Inputs and Outputs
D. Grahame Hardie et al.
TRENDS IN CELL BIOLOGY (2016)
Evolving Lessons on the Complex Role of AMPK in Normal Physiology and Cancer
Biplab Dasgupta et al.
TRENDS IN PHARMACOLOGICAL SCIENCES (2016)
Concise Review: Epigenetic Regulation of Myogenesis in Health and Disease
Marie-Claude Sincennes et al.
STEM CELLS TRANSLATIONAL MEDICINE (2016)
DNA Methylation in Skeletal Muscle Stem Cell Specification, Proliferation, and Differentiation
Rhianna C. Laker et al.
STEM CELLS INTERNATIONAL (2016)
Regulation and function of AMPK in physiology and diseases
Sang-Min Jeon
EXPERIMENTAL AND MOLECULAR MEDICINE (2016)
Phosphorylation of TET Proteins Is Regulated via O-GlcNAcylation by the O-Linked N-Acetylglucosamine Transferase (OGT)
Christina Bauer et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2015)
AMP-activated Protein Kinase Stimulates Warburg-like Glycolysis and Activation of Satellite Cells during Muscle Regeneration
Xing Fu et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2015)
CRL4VprBP E3 Ligase Promotes Monoubiquitylation and Chromatin Binding of TET Dioxygenases
Tadashi Nakagawa et al.
MOLECULAR CELL (2015)
Function and information content of DNA methylation
Dirk Schuebeler
NATURE (2015)
PAX3 and PAX7 as upstream regulators of myogenesis
Margaret Buckingham et al.
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2015)
DNA methylation dynamics in muscle development and disease
Elvira Carrio et al.
FRONTIERS IN AGING NEUROSCIENCE (2015)
PhosphoSitePlus, 2014: mutations, PTMs and recalibrations
Peter V. Hornbeck et al.
NUCLEIC ACIDS RESEARCH (2015)
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
Yang Liao et al.
BIOINFORMATICS (2014)
MEDIPS: genome-wide differential coverage analysis of sequencing data derived from DNA enrichment experiments
Matthias Lienhard et al.
BIOINFORMATICS (2014)
Differential Regulation of the Ten-Eleven Translocation (TET) Family of Dioxygenases by O-Linked β-N-Acetylglucosamine Transferase (OGT)
Qiao Zhang et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2014)
A comparative encyclopedia of DNA elements in the mouse genome
Feng Yue et al.
NATURE (2014)
ZBED6 Modulates the Transcription of Myogenic Genes in Mouse Myoblast Cells
Lin Jiang et al.
PLOS ONE (2014)
Regulation of TET Protein Stability by Calpains
Yu Wang et al.
CELL REPORTS (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
TET2 and TET3 regulate GlcNAcylation and H3K4 methylation through OGT and SET1/COMPASS
Rachel Deplus et al.
EMBO JOURNAL (2013)
Dynamic binding of RBPJ is determined by Notch signaling status
David Castel et al.
GENES & DEVELOPMENT (2013)
Tet Proteins Connect the O-Linked N-acetylglucosamine Transferase Ogt to Chromatin in Embryonic Stem Cells
Pietro Vella et al.
MOLECULAR CELL (2013)
eRNAs Promote Transcription by Establishing Chromatin Accessibility at Defined Genomic Loci
Kambiz Mousavi et al.
MOLECULAR CELL (2013)
TET2 promotes histone O-GlcNAcylation during gene transcription
Qiang Chen et al.
NATURE (2013)
TET enzymes, TDG and the dynamics of DNA demethylation
Rahul M. Kohli et al.
NATURE (2013)
Modulation of TET2 expression and 5-methylcytosine oxidation by the CXXC domain protein IDAX
Myunggon Ko et al.
NATURE (2013)
Transcriptional Dominance of Pax7 in Adult Myogenesis Is Due to High-Affinity Recognition of Homeodomain Motifs
Vahab D. Soleimani et al.
DEVELOPMENTAL CELL (2012)
Genome-wide identification of enhancers in skeletal muscle: the role of MyoD1
Roy Blum et al.
GENES & DEVELOPMENT (2012)
GENCODE: The reference human genome annotation for The ENCODE Project
Jennifer Harrow et al.
GENOME RESEARCH (2012)
Polycomb Protein Ezh1 Promotes RNA Polymerase II Elongation
Kambiz Mousavi et al.
MOLECULAR CELL (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Thymine DNA Glycosylase Is Essential for Active DNA Demethylation by Linked Deamination-Base Excision Repair
Salvatore Cortellino et al.
CELL (2011)
Sequentially acting Sox transcription factors in neural lineage development
Maria Bergsland et al.
GENES & DEVELOPMENT (2011)
Genome-wide remodeling of the epigenetic landscape during myogenic differentiation
Patrik Asp et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
AMP-activated protein kinase (AMPK) β1β2 muscle null mice reveal an essential role for AMPK in maintaining mitochondrial content and glucose uptake during exercise
Hayley M. O'Neill et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Phosphorylation of ULK1 (hATG1) by AMP-Activated Protein Kinase Connects Energy Sensing to Mitophagy
Daniel F. Egan et al.
SCIENCE (2011)
Tet-Mediated Formation of 5-Carboxylcytosine and Its Excision by TDG in Mammalian DNA
Yu-Fei He et al.
SCIENCE (2011)
Tet Proteins Can Convert 5-Methylcytosine to 5-Formylcytosine and 5-Carboxylcytosine
Shinsuke Ito et al.
SCIENCE (2011)
Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
Sven Heinz et al.
MOLECULAR CELL (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
AMPK: Lessons from transgenic and knockout animals
Benoit Viollet et al.
FRONTIERS IN BIOSCIENCE-LANDMARK (2009)
Conversion of 5-Methylcytosine to 5-Hydroxymethylcytosine in Mammalian DNA by MLL Partner TET1
Mamta Tahiliani et al.
SCIENCE (2009)
The Nuclear DNA Base 5-Hydroxymethylcytosine Is Present in Purkinje Neurons and the Brain
Skirmantas Kriaucionis et al.
SCIENCE (2009)
Codependent Activators Direct Myoblast-Specific MyoD Transcription
Ping Hu et al.
DEVELOPMENTAL CELL (2008)
The energy sensor AMP-activated protein kinase directly regulates the mammalian FOXO3 transcription factor
Eric L. Greer et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
Effects of α-AMPK knockout on exercise-induced gene activation in mouse skeletal muscle
SB Jorgensen et al.
FASEB JOURNAL (2005)
The UCSC Table Browser data retrieval tool
D Karolchik et al.
NUCLEIC ACIDS RESEARCH (2004)
WebLogo: A sequence logo generator
GE Crooks et al.
GENOME RESEARCH (2004)
Scansite 2.0: proteome-wide prediction of cell signaling interactions using short sequence motifs
JC Obenauer et al.
NUCLEIC ACIDS RESEARCH (2003)
Distinct enhancers regulate neural expression of Pax7
D Lang et al.
GENOMICS (2003)
Pax7 is required for the specification of myogenic satellite cells
P Seale et al.
CELL (2000)