4.6 Article

Comparative genome analysis reveals niche-specific genome expansion in Acinetobacter baumannii strains

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Multidisciplinary Sciences

High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries

Chirag Jain et al.

NATURE COMMUNICATIONS (2018)

Article Biochemistry & Molecular Biology

CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database

Baofeng Jia et al.

NUCLEIC ACIDS RESEARCH (2017)

Article Biochemistry & Molecular Biology

Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation

Sergey Koren et al.

GENOME RESEARCH (2017)

Article Biochemical Research Methods

HISEA: HIerarchical SEed Aligner for PacBio data

Nilesh Khiste et al.

BMC BIOINFORMATICS (2017)

Article Microbiology

Intraspecies Transfer of the Chromosomal Acinetobacter baumannii blaNDM-1 Carbapenemase Gene

Thomas Krahn et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2016)

Article Biochemistry & Molecular Biology

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

Sudhir Kumar et al.

MOLECULAR BIOLOGY AND EVOLUTION (2016)

Article Multidisciplinary Sciences

BPGA- an ultra-fast pan-genome analysis pipeline

Narendrakumar M. Chaudhari et al.

SCIENTIFIC REPORTS (2016)

Article Microbiology

Multidrug Resistant and Extensively Drug Resistant Bacteria: A Study

Silpi Basak et al.

JOURNAL OF PATHOGENS (2016)

Article Biochemical Research Methods

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

Felipe A. Simao et al.

BIOINFORMATICS (2015)

Article Biotechnology & Applied Microbiology

Gene Transfer Potential of Outer Membrane Vesicles of Acinetobacter baylyi and Effects of Stress on Vesiculation

Shweta Fulsundar et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2014)

Article Biochemical Research Methods

Prokka: rapid prokaryotic genome annotation

Torsten Seemann

BIOINFORMATICS (2014)

Review Microbiology

OXA β-Lactamases

Benjamin A. Evans et al.

CLINICAL MICROBIOLOGY REVIEWS (2014)

Review Immunology

Acinetobacter baumannii: evolution of a global pathogen

Luisa C. S. Antunes et al.

PATHOGENS AND DISEASE (2014)

Article Microbiology

OXA-235, a Novel Class D β-Lactamase Involved in Resistance to Carbapenems in Acinetobacter baumannii

Paul G. Higgins et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2013)

Review Infectious Diseases

Clinical relevance of the ESKAPE pathogens

Jack N. Pendleton et al.

EXPERT REVIEW OF ANTI-INFECTIVE THERAPY (2013)

Review Cell Biology

Host-microbe interactions that shape the pathogenesis of Acinetobacter baumannii infection

Brittany L. Mortensen et al.

CELLULAR MICROBIOLOGY (2012)

Review Microbiology

Efflux-Mediated Antibiotic Resistance in Acinetobacter spp.

Sebastien Coyne et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2011)

Article Biotechnology & Applied Microbiology

Investigation of the human pathogen Acinetobacter baumannii under iron limiting conditions

Bart A. Eijkelkamp et al.

BMC GENOMICS (2011)

Article Biotechnology & Applied Microbiology

Purification and Characterization of Catechol 1,2-Dioxygenase from Acinetobacter sp DS002 and Cloning, Sequencing of Partial catA Gene

Emmanuel Vijay Paul Pandeeti et al.

INDIAN JOURNAL OF MICROBIOLOGY (2011)

Article Microbiology

Genome Sequence of Acinetobacter baumannii MDR-TJ

Feng Gao et al.

JOURNAL OF BACTERIOLOGY (2011)

Article Microbiology

Use of the Accessory Genome for Characterization and Typing of Acinetobacter baumannii

Jane F. Turton et al.

JOURNAL OF CLINICAL MICROBIOLOGY (2011)

Article Biochemical Research Methods

Prodigal: prokaryotic gene recognition and translation initiation site identification

Doug Hyatt et al.

BMC BIOINFORMATICS (2010)

Review Pharmacology & Pharmacy

Treatment of Acinetobacter infections

Argyris Michalopoulos et al.

EXPERT OPINION ON PHARMACOTHERAPY (2010)

Article Microbiology

The Opportunistic Human Pathogen Acinetobacter baumannii Senses and Responds to Light

Maria A. Mussi et al.

JOURNAL OF BACTERIOLOGY (2010)

Editorial Material Microbiology

The Surprising Rut Pathway: an Unexpected Way To Derive Nitrogen from Pyrimidines

Rebecca E. Parales et al.

JOURNAL OF BACTERIOLOGY (2010)

Article Microbiology

The Rut Pathway for Pyrimidine Degradation: Novel Chemistry and Toxicity Problems

Kwang-Seo Kim et al.

JOURNAL OF BACTERIOLOGY (2010)

Review Microbiology

Biochemistry of Microbial Degradation of Hexachlorocyclohexane and Prospects for Bioremediation

Rup Lal et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2010)

Article Immunology

Worldwide Dissemination of the bla(OXA-23) Carbapenemase Gene of Acinetobacter baumanni

Pauline D. Mugnier et al.

EMERGING INFECTIOUS DISEASES (2010)

Article Microbiology

OXA-143, a Novel Carbapenem-Hydrolyzing Class D β-Lactamase in Acinetobacter baumannii

Paul G. Higgins et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2009)

Article Immunology

Bad Bugs, No Drugs: No ESKAPE! An Update from the Infectious Diseases Society of America

Helen W. Boucher et al.

CLINICAL INFECTIOUS DISEASES (2009)

Article Microbiology

Regulation of Acinetobacter baumannii biofilm formation

Jennifer A. Gaddy et al.

FUTURE MICROBIOLOGY (2009)

Review Biochemistry & Molecular Biology

Multidrug resistant Acinetobacter baumannii - the role of AdeABC (RND family) efflux pump in resistance to antibiotics

Piotr Wieczorek et al.

FOLIA HISTOCHEMICA ET CYTOBIOLOGICA (2008)

Article Microbiology

Comparative Genome Sequence Analysis of Multidrug-Resistant Acinetobacter baumannii

Mark D. Adams et al.

JOURNAL OF BACTERIOLOGY (2008)

Editorial Material Immunology

Federal funding for the study of antimicrobial resistance in nosocomial pathogens: No ESKAPE

Louis B. Rice

JOURNAL OF INFECTIOUS DISEASES (2008)

Article Multidisciplinary Sciences

Comparative Analysis of Acinetobacters: Three Genomes for Three Lifestyles

David Vallenet et al.

PLOS ONE (2008)

Article Microbiology

The role of ISAba1 in expression of OXA carbapenemase genes in Acinetobacter baumannii

JF Turton et al.

FEMS MICROBIOLOGY LETTERS (2006)

Article Multidisciplinary Sciences

A previously undescribed pathway for pyrimidine catabolism

KD Loh et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Genetics & Heredity

Comparative genomics of multidrug resistance in Acinetobacter baumannii

Pierre-Edouard Fournier et al.

PLOS GENETICS (2006)

Article Microbiology

Characterization of the naturally occurring oxacillinase of Acinetobacter baumannii

C Héritier et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2005)

Review Microbiology

Mechanisms of, and barriers to, horizontal gene transfer between bacteria

CM Thomas et al.

NATURE REVIEWS MICROBIOLOGY (2005)

Article Biochemistry & Molecular Biology

The oxygenase component of phenol hydroxylase from Acinetobacter radioresistens S13

S Divari et al.

EUROPEAN JOURNAL OF BIOCHEMISTRY (2003)

Article Biochemistry & Molecular Biology

Characterization of short-chain dehydrogenase/reductase homologues of Escherichia coli (YdfG) and Saccharomyces cerevisiae (YMR226C)

H Fujisawa et al.

BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS (2003)

Article Multidisciplinary Sciences

Nitrogen regulatory protein C-controlled genes of Escherichia coli:: Scavenging as a defense against nitrogen limitation

DP Zimmer et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)

Review Multidisciplinary Sciences

Changing patterns of infectious disease

ML Cohen

NATURE (2000)