4.7 Article

Whole Genome Sequencing of the Blue Tilapia (Oreochromis aureus) Provides a Valuable Genetic Resource for Biomedical Research on Tilapias

期刊

MARINE DRUGS
卷 17, 期 7, 页码 -

出版社

MDPI
DOI: 10.3390/md17070386

关键词

blue tilapia (Oreochromis aureus); whole genome sequencing; genome assembly; genome annotation; antimicrobial peptide

资金

  1. Shenzhen Special Program for Development of Emerging Strategic Industries [JSGG20170412153411369]
  2. Shenzhen Dapeng Special Program for Industrial Development [KY20190108, KY20180205, KY20160307]

向作者/读者索取更多资源

Blue tilapia (Oreochromis aureus) has been an economically important fish in Asian countries. It can grow and reproduce in both freshwater and brackish water conditions, whereas it is also considered as a significant invasive species around the world. This species has been widely used as the hybridization parent(s) for tilapia breeding with a major aim to produce novel strains. However, available genomic resources are still limited for this important tilapia species. Here, we for the first time sequenced and assembled a draft genome for a seawater cultured blue tilapia (0.92 Gb), with 97.8% completeness and a scaffold N50 of 1.1 Mb, which suggests a relatively high quality of this genome assembly. We also predicted 23,117 protein-coding genes in the blue tilapia genome. Comparisons of predicted antimicrobial peptides between the blue tilapia and its close relative Nile tilapia proved that these immunological genes are highly similar with a genome-wide scattering distribution. As a valuable genetic resource, our blue tilapia genome assembly will benefit for biomedical researches and practical molecular breeding for high resistance to various diseases, which have been a critical problem in the aquaculture of tilapias.

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