相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Leveraging Existing 16S rRNA Gene Surveys To Identify Reproducible Biomarkers in Individuals with Colorectal Tumors
Marc A. Sze et al.
MBIO (2018)
Identifying and Overcoming Threats to Reproducibility, Replicability, Robustness, and Generalizability in Microbiome Research
Patrick D. Schloss
MBIO (2018)
Systematic Bias Introduced by Genomic DNA Template Dilution in 16S rRNA Gene-Targeted Microbiota Profiling in Human Stool Homogenates
Francesco Multinu et al.
MSPHERE (2018)
Earth Microbiome Project and Global Systems Biology
Jack A. Gilbert et al.
MSYSTEMS (2018)
Assessment of variation in microbial community amplicon sequencing by the Microbiome Quality Control (MBQC) project consortium
Rashmi Sinha et al.
NATURE BIOTECHNOLOGY (2017)
Towards standards for human fecal sample processing in metagenomic studies
Paul I. Costea et al.
NATURE BIOTECHNOLOGY (2017)
OptiClust, an Improved Method for Assigning Amplicon-Based Sequence Data to Operational Taxonomic Units
Sarah L. Westcott et al.
MSPHERE (2017)
Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns
Amnon Amir et al.
MSYSTEMS (2017)
Correcting for Microbial Blooms in Fecal Samples during Room-Temperature Shipping
Amnon Amir et al.
MSYSTEMS (2017)
Examining Sources of Error in PCR by Single-Molecule Sequencing
Vladimir Potapov et al.
PLOS ONE (2017)
Comparison of stool versus rectal swab samples and storage conditions on bacterial community profiles
Christine M. Bassis et al.
BMC MICROBIOLOGY (2017)
Collecting Fecal Samples for Microbiome Analyses in Epidemiology Studies
Rashmi Sinha et al.
CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION (2016)
Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples
Alma E. Parada et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
Effects of Specimen Collection Methodologies and Storage Conditions on the Short-Term Stability of Oral Microbiome Taxonomy
Ting Luo et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2016)
Toward Accurate and Quantitative Comparative Metagenomics
Stephen Nayfach et al.
CELL (2016)
Skin Microbiome Surveys Are Strongly Influenced by Experimental Design
Jacquelyn S. Meisel et al.
JOURNAL OF INVESTIGATIVE DERMATOLOGY (2016)
Systematic improvement of amplicon marker gene methods for increased accuracy in microbiome studies
Daryl M. Gohl et al.
NATURE BIOTECHNOLOGY (2016)
DADA2: High-resolution sample inference from Illumina amplicon data
Benjamin J. Callahan et al.
NATURE METHODS (2016)
The impact of sampling, PCR, and sequencing replication on discerning changes in drinking water bacterial community over diurnal time-scales
Quyen Melina Bautista-de los Santos et al.
WATER RESEARCH (2016)
Status of the Archaeal and Bacterial Census: an Update
Patrick D. Schloss et al.
MBIO (2016)
Looking for a Signal in the Noise: Revisiting Obesity and the Microbiome
Marc A. Sze et al.
MBIO (2016)
Dynamics of the fecal microbiome in patients with recurrent and nonrecurrent Clostridium difficile infection
Anna Maria Seekatz et al.
GENOME MEDICINE (2016)
VSEARCH: a versatile open source tool for metagenomics
Torbjorn Rognes et al.
PEERJ (2016)
Preservation Methods Differ in Fecal Microbiome Stability, Affecting Suitability for Field Studies
Se Jin Song et al.
MSYSTEMS (2016)
The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies
J. Paul Brooks et al.
BMC MICROBIOLOGY (2015)
Sources of PCR-induced distortions in high-throughput sequencing data sets
Justus M. Kebschull et al.
NUCLEIC ACIDS RESEARCH (2015)
Methods for Improving Human Gut Microbiome Data by Reducing Variability through Sample Processing and Storage of Stool
Monika A. Gorzelak et al.
PLOS ONE (2015)
Evaluating Bias of Illumina-Based Bacterial 16S rRNA Gene Profiles
Katherine Kennedy et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2014)
Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
Susannah J. Salter et al.
BMC BIOLOGY (2014)
Comparison of methods for fecal microbiome biospecimen collection
Christine Dominianni et al.
BMC MICROBIOLOGY (2014)
Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform
James J. Kozich et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing
Nicholas A. Bokulich et al.
NATURE METHODS (2013)
Structure, function and diversity of the healthy human microbiome
Curtis Huttenhower et al.
NATURE (2012)
UCHIME improves sensitivity and speed of chimera detection
Robert C. Edgar et al.
BIOINFORMATICS (2011)
Removing Noise From Pyrosequenced Amplicons
Christopher Quince et al.
BMC BIOINFORMATICS (2011)
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
Brian J. Haas et al.
GENOME RESEARCH (2011)
Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies
Patrick D. Schloss et al.
PLOS ONE (2011)
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
J. Gregory Caporaso et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Effect of storage conditions on the assessment of bacterial community structure in soil and human-associated samples
Christian L. Lauber et al.
FEMS MICROBIOLOGY LETTERS (2010)
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Patrick D. Schloss et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Amplification of complex gene libraries by emulsion PCR
Richard Williams et al.
NATURE METHODS (2006)
PCR-induced sequence artifacts and bias: Insights from comparison of two 16S rRNA clone libraries constructed from the same sample
SG Acinas et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
分享论文
