4.8 Article

Genome-wide effects on Escherichia coli transcription from ppGpp binding to its two sites on RNA polymerase

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Affinity-based capture and identification of protein effectors of the growth regulator ppGpp

Boyuan Wang et al.

NATURE CHEMICAL BIOLOGY (2019)

Review Biochemistry & Molecular Biology

Transcriptional Responses to ppGpp and DksA

Richard L. Gourse et al.

ANNUAL REVIEW OF MICROBIOLOGY, VOL 72 (2018)

Article Biochemistry & Molecular Biology

The EcoCyc database: reflecting new knowledge about Escherichia coli K-12

Ingrid M. Keseler et al.

NUCLEIC ACIDS RESEARCH (2017)

Article Cell Biology

Dissection of the molecular circuitry controlling virulence in Francisella tularensis

Bonnie J. Cuthbert et al.

GENES & DEVELOPMENT (2017)

Article Multidisciplinary Sciences

Open complex scrunching before nucleotide addition accounts for the unusual transcription start site of E. coli ribosomal RNA promoters

Jared T. Winkelman et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Article Biochemistry & Molecular Biology

Structural and Functional Analysis of BipA, a Regulator of Virulence in Enteropathogenic Escherichia coli

Haitian Fan et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2015)

Review Microbiology

Recent functional insights into the role of (p)ppGpp in bacterial physiology

Vasili Hauryliuk et al.

NATURE REVIEWS MICROBIOLOGY (2015)

Article Biochemistry & Molecular Biology

Structural and Functional Insights into the Mode of Action of a Universally Conserved Obg GTPase

Boya Feng et al.

PLOS BIOLOGY (2014)

Article Biochemistry & Molecular Biology

Positive allosteric feedback regulation of the stringent response enzyme RelA by its product

Viktoriya Shyp et al.

EMBO REPORTS (2012)

Article Biochemistry & Molecular Biology

Crystal structure analysis of the translation factor RF3 (release factor 3)

Kiyohito Kihira et al.

FEBS LETTERS (2012)

Article Biochemistry & Molecular Biology

Direct Regulation of GTP Homeostasis by (p)ppGpp: A Critical Component of Viability and Stress Resistance

Allison Kriel et al.

MOLECULAR CELL (2012)

Article Biochemistry & Molecular Biology

Structural Basis for Promoter-10 Element Recognition by the Bacterial RNA Polymerase σ Subunit

Andrey Feklistov et al.

Article Biochemistry & Molecular Biology

The dksA promoter is negatively feedback regulated by DksA and ppGpp

Pete Chandrangsu et al.

MOLECULAR MICROBIOLOGY (2011)

Article Multidisciplinary Sciences

X-ray crystal structures elucidate the nucleotidyl transfer reaction of transcript initiation using two nucleotides

Michael L. Gleghorn et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Multidisciplinary Sciences

Direct regulation of Escherichia coli ribosomal protein promoters by the transcription factors ppGpp and DksA

Justin J. Lemke et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Genetics & Heredity

ppGpp inhibits the activity of Escherichia coli DnaG primase

Monika Maciag et al.

PLASMID (2010)

Article Biochemistry & Molecular Biology

DksA and ppGpp directly regulate transcription of the Escherichia coli flagellar cascade

Justin J. Lemke et al.

MOLECULAR MICROBIOLOGY (2009)

Review Genetics & Heredity

RNA-Seq: a revolutionary tool for transcriptomics

Zhong Wang et al.

NATURE REVIEWS GENETICS (2009)

Article Biochemistry & Molecular Biology

The global, ppGpp-mediated stringent response to amino acid starvation in Escherichia coli

Matthew F. Traxler et al.

MOLECULAR MICROBIOLOGY (2008)

Article Biochemistry & Molecular Biology

Regulation of the fimB promoter:: a case of differential regulation by ppGpp and DksA in vivo

Anna Aberg et al.

MOLECULAR MICROBIOLOGY (2008)

Review Microbiology

Advances in bacterial promoter recognition and its control by factors that do not bind DNA

Shanil P. Haugen et al.

NATURE REVIEWS MICROBIOLOGY (2008)

Review Microbiology

Transcription profiling of the stringent response in Escherichia coli

Tim Durfee et al.

JOURNAL OF BACTERIOLOGY (2008)

Article Multidisciplinary Sciences

DksA potentiates direct activation of amino acid promoters by ppGpp

BJ Paul et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Biochemistry & Molecular Biology

WebLogo: A sequence logo generator

GE Crooks et al.

GENOME RESEARCH (2004)

Article Biochemistry & Molecular Biology

Control of rRNA expression by small molecules is dynamic and nonredundant

HD Murray et al.

MOLECULAR CELL (2003)

Article Microbiology

Regulation of rRNA transcription correlates with nucleoside triphosphate sensing

MM Barker et al.

JOURNAL OF BACTERIOLOGY (2001)