相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Protein Flexibility and Synergy of HMG Domains Underlie U-Turn Bending of DNA by TFAM in Solution
Anna Rubio-Cosials et al.
BIOPHYSICAL JOURNAL (2018)
A common pattern of DNase I footprinting throughout the human mtDNA unveils clues for a chromatin-like organization
Amit Blumberg et al.
GENOME RESEARCH (2018)
Mitochondria are physiologically maintained at close to 50 degrees C
Dominique Chretien et al.
PLOS BIOLOGY (2018)
High precision FRET studies reveal reversible transitions in nucleosomes between microseconds and minutes
Alexander Gansen et al.
NATURE COMMUNICATIONS (2018)
Enthalpy-entropy compensation: the role of solvation
Anatoliy I. Dragan et al.
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS (2017)
DNA structure directs positioning of the mitochondrial genome packaging protein Abf2p
Arka Chakraborty et al.
NUCLEIC ACIDS RESEARCH (2017)
Human mitochondrial transcription factors TFAM and TFB2M work synergistically in promoter melting during transcription initiation
Aparna Ramachandran et al.
NUCLEIC ACIDS RESEARCH (2017)
Mitochondrial activity and dynamics changes regarding metabolism in ageing and obesity
Guillermo Lopez-Lluch
MECHANISMS OF AGEING AND DEVELOPMENT (2017)
The human mitochondrial transcription factor A is a versatile G-quadruplex binding protein
Sebastien Lyonnais et al.
SCIENTIFIC REPORTS (2017)
Unexpected sequences and structures of mtDNA required for efficient transcription from the first heavy-strand promoter
Akira Uchida et al.
ELIFE (2017)
Functional Mitochondria in Health and Disease
Patries M. Herst et al.
FRONTIERS IN ENDOCRINOLOGY (2017)
Structural Basis of Mitochondrial Transcription Initiation
Hauke S. Hillen et al.
CELL (2017)
Mechanism of Transcription Anti-termination in Human Mitochondria
Hauke S. Hillen et al.
CELL (2017)
Parmbsc1: a refined force field for DNA simulations
Ivan Ivani et al.
NATURE METHODS (2016)
Human Mitochondrial Transcription Initiation Complexes Have Similar Topology on the Light and Heavy Strand Promoters
Yaroslav I. Morozov et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2016)
Length heterogeneity at conserved sequence block 2 in human mitochondrial DNA acts as a rheostat for RNA polymerase POLRMT activity
Benedict G. Tan et al.
NUCLEIC ACIDS RESEARCH (2016)
Multiscale modelling of DNA mechanics
Tomas Drsata et al.
JOURNAL OF PHYSICS-CONDENSED MATTER (2015)
Mitochondrial Transcription Factor A (TFAM) Binds to RNA Containing 4-Way Junctions and Mitochondrial tRNA
Timothy A. Brown et al.
PLOS ONE (2015)
Cross-strand binding of TFAM to a single mtDNA molecule forms the mitochondrial nucleoid
Christian Kukat et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Disturbed mitochondrial dynamics and neurodegenerative disorders
Florence Burte et al.
NATURE REVIEWS NEUROLOGY (2015)
Distinct structural features of TFAM drive mitochondrial DNA packaging versus transcriptional activation
Huu B. Ngo et al.
NATURE COMMUNICATIONS (2014)
In Vitro-Reconstituted Nucleoids Can Block Mitochondrial DNA Replication and Transcription
Geraldine Farge et al.
CELL REPORTS (2014)
U-turn DNA bending by human mitochondrial transcription factor A
Anna Rubio-Cosials et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2013)
NAFlex: a web server for the study of nucleic acid flexibility
Adam Hospital et al.
NUCLEIC ACIDS RESEARCH (2013)
Understanding the Connection between Epigenetic DNA Methylation and Nucleosome Positioning from Computer Simulations
Guillem Portella et al.
PLOS COMPUTATIONAL BIOLOGY (2013)
Mitochondrial transcription factor A regulates mitochondrial transcription initiation, DNA packaging, and genome copy number
Christopher T. Campbell et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2012)
Transcriptional activation by mitochondrial transcription factor A involves preferential distortion of promoter DNA
Christopher S. Malarkey et al.
NUCLEIC ACIDS RESEARCH (2012)
A hybrid G-quadruplex structure formed between RNA and DNA explains the extraordinary stability of the mitochondrial R-loop
Paulina H. Wanrooij et al.
NUCLEIC ACIDS RESEARCH (2012)
Protein sliding and DNA denaturation are essential for DNA organization by human mitochondrial transcription factor A
Geraldine Farge et al.
NATURE COMMUNICATIONS (2012)
Overview of the CCP4 suite and current developments
Martyn D. Winn et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2011)
Physical properties of naked DNA influence nucleosome positioning and correlate with transcription start and termination sites in yeast
Oezgen Deniz et al.
BMC GENOMICS (2011)
Human mitochondrial transcription factor A induces a U-turn structure in the light strand promoter
Anna Rubio-Cosials et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2011)
The mitochondrial transcription and packaging factor Tfam imposes a U-turn on mitochondrial DNA
Huu B. Ngo et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2011)
XDS
Wolfgang Kabsch
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)
G-quadruplex structures in RNA stimulate mitochondrial transcription termination and primer formation
Paulina H. Wanrooij et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Biophysical characterizations of human mitochondrial transcription factor A and its binding to tumor suppressor p53
Tuck Seng Wong et al.
NUCLEIC ACIDS RESEARCH (2009)
Structural analysis and DNA binding of the HMG domains of the human mitochondrial transcription factor A
Todd A. Gangelhoff et al.
NUCLEIC ACIDS RESEARCH (2009)
Conformational analysis of nucleic acids revisited: Curves
R. Lavery et al.
NUCLEIC ACIDS RESEARCH (2009)
The unique structure of A-tracts and intrinsic DNA bending
Tali E. Haran et al.
QUARTERLY REVIEWS OF BIOPHYSICS (2009)
The cost of DNA bending
Peter L. Privalov et al.
TRENDS IN BIOCHEMICAL SCIENCES (2009)
Dynamics of B-DNA on the microsecond time scale
Alberto Perez et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2007)
Phaser crystallographic software
Airlie J. McCoy et al.
JOURNAL OF APPLIED CRYSTALLOGRAPHY (2007)
What drives proteins into the major or minor grooves of DNA?
Peter L. Privalov et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
An enhanced MITOMAP with a global mtDNA mutational phylogeny
Eduardo Ruiz-Pesini et al.
NUCLEIC ACIDS RESEARCH (2007)
Conserved sequence box II directs transcription termination and primer formation in mitochondriaw2
Xuan Hoi Pham et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
Coot:: model-building tools for molecular graphics
P Emsley et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2004)
DNA binding and bending by HMG boxes: Energetic determinants of specificity
AI Dragan et al.
JOURNAL OF MOLECULAR BIOLOGY (2004)
Human mitochondrial transcription factor A binds preferentially to oxidatively damaged DNA
Y Yoshida et al.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2002)
Size-distribution analysis of proteins by analytical ultracentrifugation: Strategies and application to model systems
P Schuck et al.
BIOPHYSICAL JOURNAL (2002)
Trajectory of nucleosomal linker DNA studied by fluorescence resonance energy transfer
K Tóth et al.
BIOCHEMISTRY (2001)
Structural and thermodynamic strategies for site-specific DNA binding proteins
L Jen-Jacobson et al.
STRUCTURE (2000)
Binding of human mitochondrial transcription factor A, an HMG box protein, to a four-way DNA junction
T Ohno et al.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2000)
Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and Lamm equation modeling
P Schuck
BIOPHYSICAL JOURNAL (2000)
分享论文
