相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Characterization of cell fate probabilities in single-cell data with Palantir
Manu Setty et al.
NATURE BIOTECHNOLOGY (2019)
Recovering Gene Interactions from Single-Cell Data Using Data Diffusion
David van Dijk et al.
CELL (2018)
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment
Elham Azizi et al.
CELL (2018)
A Sprouty4 reporter to monitor FGF/ERK signaling activity in ESCs and mice
Sophie M. Morgani et al.
DEVELOPMENTAL BIOLOGY (2018)
Defining murine organogenesis at single-cell resolution reveals a role for the leukotriene pathway in regulating blood progenitor formation
Ximena Ibarra-Soria et al.
NATURE CELL BIOLOGY (2018)
Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis
Jeffrey A. Farrell et al.
SCIENCE (2018)
In vitro patterning of pluripotent stem cell-derived intestine recapitulates in vivo human development
Yu-Hwai Tsai et al.
DEVELOPMENT (2017)
Massively parallel digital transcriptional profiling of single cells
Grace X. Y. Zheng et al.
NATURE COMMUNICATIONS (2017)
Pluripotent stem cell differentiation reveals distinct developmental pathways regulating lung- versus thyroid-lineage specification
Maria Serra et al.
DEVELOPMENT (2017)
Lineage Establishment and Progression within the Inner Cell Mass of the Mouse Blastocyst Requires FGFR1 and FGFR2
Minjung Kang et al.
DEVELOPMENTAL CELL (2017)
Distinct Requirements for FGFR1 and FGFR2 in Primitive Endoderm Development and Exit from Pluripotency
Andrei Molotkov et al.
DEVELOPMENTAL CELL (2017)
Pluripotent stem cell-derived organoids: using principles of developmental biology to grow human tissues in a dish
Heather A. McCauley et al.
DEVELOPMENT (2017)
Lineage specification in the mouse preimplantation embryo
Claire Chazaud et al.
DEVELOPMENT (2016)
Cell Competition and Its Role in the Regulation of Cell Fitness from Development to Cancer
Aida Di Gregorio et al.
DEVELOPMENTAL CELL (2016)
Wishbone identifies bifurcating developmental trajectories from single-cell data
Manu Setty et al.
NATURE BIOTECHNOLOGY (2016)
Diffusion pseudotime robustly reconstructs lineage branching
Laleh Haghverdi et al.
NATURE METHODS (2016)
Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis
Jacob H. Levine et al.
CELL (2015)
GATA6 Levels Modulate Primitive Endoderm Cell Fate Choice and Timing in the Mouse Blastocyst
Nadine Schrode et al.
DEVELOPMENTAL CELL (2014)
Cell-to-cell expression variability followed by signal reinforcement progressively segregates early mouse lineages
Yusuke Ohnishi et al.
NATURE CELL BIOLOGY (2014)
SOX17 links gut endoderm morphogenesis and germ layer segregation
Manuel Viotti et al.
NATURE CELL BIOLOGY (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
FGF4 is required for lineage restriction and salt-and-pepper distribution of primitive endoderm factors but not their initial expression in the mouse
Minjung Kang et al.
DEVELOPMENT (2013)
External Mechanical Cues Trigger the Establishment of the Anterior-Posterior Axis in Early Mouse Embryos
Ryuji Hiramatsu et al.
DEVELOPMENTAL CELL (2013)
viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia
El-ad David Amir et al.
NATURE BIOTECHNOLOGY (2013)
Stage specific reprogramming of mouse embryo liver cells to a beta cell-like phenotype
Ying Yang et al.
MECHANISMS OF DEVELOPMENT (2013)
Totipotent Embryonic Stem Cells Arise in Ground-State Culture Conditions
Sophie M. Morgani et al.
CELL REPORTS (2013)
Software for Computing and Annotating Genomic Ranges
Michael Lawrence et al.
PLOS COMPUTATIONAL BIOLOGY (2013)
BMP signaling induces visceral endoderm differentiation of XEN cells and parietal endoderm
Agnieszka Paca et al.
DEVELOPMENTAL BIOLOGY (2012)
BMP4 signaling directs primitive endoderm-derived XEN cells to an extraembryonic visceral endoderm identity
Jerome Artus et al.
DEVELOPMENTAL BIOLOGY (2012)
Regulation of extra-embryonic endoderm stem cell differentiation by Nodal and Cripto signaling
Marianna Kruithof-de Julio et al.
DEVELOPMENT (2011)
The primitive endoderm lineage of the mouse blastocyst: Sequential transcription factor activation and regulation of differentiation by Sox17
Jerome Artus et al.
DEVELOPMENTAL BIOLOGY (2011)
Afp::mCherry, a Red Fluorescent Transgenic Reporter of the Mouse Visceral Endoderm
Manuel Viotti et al.
GENESIS (2011)
Origin and role of distal visceral endoderm, a group of cells that determines anterior-posterior polarity of the mouse embryo
Katsuyoshi Takaoka et al.
NATURE CELL BIOLOGY (2011)
Cellular dynamics in the early mouse embryo: from axis formation to gastrulation
Sonja Nowotschin et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2010)
Vertebrate Endoderm Development and Organ Formation
Aaron M. Zorn et al.
ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY (2009)
Nanog Is the Gateway to the Pluripotent Ground State
Jose Silva et al.
CELL (2009)
Transcriptional Dynamics of Endodermal Organ Formation
Richard I. Sherwood et al.
DEVELOPMENTAL DYNAMICS (2009)
Transthyretin Mouse Transgenes Direct RFP Expression or Cre-Mediated Recombination Throughout the Visceral Endoderm
Gloria S. Kwon et al.
GENESIS (2009)
Making a commitment: cell lineage allocation and axis patterning in the early mouse embryo
Sebastian J. Arnold et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2009)
Distinct sequential cell behaviours direct primitive endoderm formation in the mouse blastocyst
Berenika Plusa et al.
DEVELOPMENT (2008)
The Endoderm of the Mouse Embryo Arises by Dynamic Widespread Intercalation of Embryonic and Extraembryonic Lineages
Gloria S. Kwon et al.
DEVELOPMENTAL CELL (2008)
A global double-fluorescent cre reporter mouse
Mandar Deepak Muzumdar et al.
GENESIS (2007)
Tg(Afp-GFP) expression marks primitive and definitive endoderm lineages during mouse development
Gloria S. Kwon et al.
DEVELOPMENTAL DYNAMICS (2006)
Early lineage segregation between epiblast and primitive endoderm in mouse blastocysts through the Grb2-MAPK pathway
Claire Chazaud et al.
DEVELOPMENTAL CELL (2006)
Developmental regulation of the Hox genes during axial morphogenesis in the mouse
J Deschamps et al.
DEVELOPMENT (2005)
Efficient gene modulation in mouse epiblast using a Sox2Cre transgenic mouse strain
Shigemi Hayashi et al.
MECHANISMS OF DEVELOPMENT (2002)
Irx1 and Irx2 expression in early lung development
MB Becker et al.
MECHANISMS OF DEVELOPMENT (2001)