相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Microbiome analysis and bacterial isolation from Lejia Lake soil in Atacama Desert
Dinka Mandakovic et al.
EXTREMOPHILES (2018)
Culturing the human microbiota and culturomics'
Jean-Christophe Lagier et al.
NATURE REVIEWS MICROBIOLOGY (2018)
Meta-scale mountain grassland observatories uncover commonalities as well as specific interactions among plant and non-rhizosphere soil bacterial communities
Erika Yashiro et al.
SCIENTIFIC REPORTS (2018)
Structure and co-occurrence patterns in microbial communities under acute environmental stress reveal ecological factors fostering resilience
Dinka Mandakovic et al.
SCIENTIFIC REPORTS (2018)
Denoising the Denoisers: an independent evaluation of microbiome sequence error-correction approaches
Jacob T. Nearing et al.
PEERJ (2018)
Where less may be more: how the rare biosphere pulls ecosystems strings
Alexandre Jousset et al.
ISME JOURNAL (2017)
Grass dominance drives rhizospheric bacterial communities in a desertic shrub and grassy steppe highland
Eugenia Menoyo et al.
PEDOBIOLOGIA (2017)
Let the Core Microbiota Be Functional
Philippe Lemanceau et al.
TRENDS IN PLANT SCIENCE (2017)
Introducing the sporobiota and sporobiome
George Tetz et al.
GUT PATHOGENS (2017)
Deciphering composition and function of the root microbiome of a legume plant
Kyle Hartman et al.
MICROBIOME (2017)
The Variation in the Rhizosphere Microbiome of Cotton with Soil Type, Genotype and Developmental Stage
Qinghua Qiao et al.
SCIENTIFIC REPORTS (2017)
Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species
Devin Coleman-Derr et al.
NEW PHYTOLOGIST (2016)
Climate and edaphic controllers influence rhizosphere community assembly for a wild annual grass
Erin E. Nuccio et al.
ECOLOGY (2016)
Rhizobacterial Community Structures Associated with Native Plants Grown in Chilean Extreme Environments
Milko A. Jorquera et al.
MICROBIAL ECOLOGY (2016)
Nitrogen cycling in an extreme hyperarid environment inferred from δ15N analyses of plants, soils and herbivore diet
Francisca P. Diaz et al.
SCIENTIFIC REPORTS (2016)
A Combination of Extreme Environmental Conditions Favor the Prevalence of Endospore-Forming Firmicutes
Sevasti Filippidou et al.
FRONTIERS IN MICROBIOLOGY (2016)
Different responses of rhizosphere and non-rhizosphere soil microbial communities to consecutive Piper nigrum L. monoculture
Zhigang Li et al.
SCIENTIFIC REPORTS (2016)
Using community analysis to explore bacterial indicators for disease suppression of tobacco bacterial wilt
Xiaojiao Liu et al.
SCIENTIFIC REPORTS (2016)
Roots Shaping Their Microbiome: Global Hotspots for Microbial Activity
Barbara Reinhold-Hurek et al.
ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 53 (2015)
Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley
Davide Bulgarelli et al.
CELL HOST & MICROBE (2015)
Plant community richness and microbial interactions structure bacterial communities in soil
Daniel C. Schlatter et al.
ECOLOGY (2015)
Structure, variation, and assembly of the root-associated microbiomes of rice
Joseph Edwards et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
The importance of species sorting differs between habitat generalists and specialists in bacterial communities
Anna J. Szekely et al.
FEMS MICROBIOLOGY ECOLOGY (2014)
Plant age and genotype affect the bacterial community composition in the tuber rhizosphere of field-grown sweet potato plants
Joana M. Marques et al.
FEMS MICROBIOLOGY ECOLOGY (2014)
Rhizosphere microbiome assemblage is affected by plant development
Jacqueline M. Chaparro et al.
ISME JOURNAL (2014)
Functional Potential of Soil Microbial Communities in the Maize Rhizosphere
Xiangzhen Li et al.
PLOS ONE (2014)
Structure and Functions of the Bacterial Microbiota of Plants
Davide Bulgarelli et al.
ANNUAL REVIEW OF PLANT BIOLOGY, VOL 64 (2013)
'Sponge-specific' bacteria are widespread (but rare) in diverse marine environments
Michael W. Taylor et al.
ISME JOURNAL (2013)
Rhizosphere Microbes as Essential Partners for Plant Stress Tolerance
Axel de Zelicourt et al.
MOLECULAR PLANT (2013)
Going back to the roots: the microbial ecology of the rhizosphere
Laurent Philippot et al.
NATURE REVIEWS MICROBIOLOGY (2013)
Bacterial Diversity of Surface Sand Samples from the Gobi and Taklamaken Deserts
Shu An et al.
MICROBIAL ECOLOGY (2013)
Plant growth-promoting rhizobacteria and root system functioning
Jordan Vacheron et al.
FRONTIERS IN PLANT SCIENCE (2013)
Colonization patterns of soil microbial communities in the Atacama Desert
Alexander Crits-Christoph et al.
MICROBIOME (2013)
Bacterial diversity in the rhizosphere of maize and the surrounding carbonate-rich bulk soil
Adela Garcia-Salamanca et al.
MICROBIAL BIOTECHNOLOGY (2013)
The plant microbiome
Thomas R. Turner et al.
GENOME BIOLOGY (2013)
Genome Diversity of Spore-Forming Firmicutes
Michael Y. Galperin
MICROBIOLOGY SPECTRUM (2013)
The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms
Rodrigo Mendes et al.
FEMS MICROBIOLOGY REVIEWS (2013)
Impact of root exudates and plant defense signaling on bacterial communities in the rhizosphere. A review
Rogier F. Doornbos et al.
AGRONOMY FOR SUSTAINABLE DEVELOPMENT (2012)
Abiotic Factors Shape Microbial Diversity in Sonoran Desert Soils
David R. Andrew et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Life at the hyperarid margin: novel bacterial diversity in arid soils of the Atacama Desert, Chile
Julia W. Neilson et al.
EXTREMOPHILES (2012)
Life at the dry edge: Microorganisms of the Atacama Desert
Armando Azua-Bustos et al.
FEBS LETTERS (2012)
Metaproteogenomic analysis of microbial communities in the phyllosphere and rhizosphere of rice
Claudia Knief et al.
ISME JOURNAL (2012)
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
Daniel McDonald et al.
ISME JOURNAL (2012)
Defining the core Arabidopsis thaliana root microbiome
Derek S. Lundberg et al.
NATURE (2012)
Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota
Davide Bulgarelli et al.
NATURE (2012)
A Drought Resistance-Promoting Microbiome Is Selected by Root System under Desert Farming
Ramona Marasco et al.
PLOS ONE (2012)
The rhizosphere microbiome and plant health
Roeland L. Berendsen et al.
TRENDS IN PLANT SCIENCE (2012)
Distinct Microbial Communities within the Endosphere and Rhizosphere of Populus deltoides Roots across Contrasting Soil Types
Neil R. Gottel et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
UCHIME improves sensitivity and speed of chimera detection
Robert C. Edgar et al.
BIOINFORMATICS (2011)
Effects of selected root exudate components on soil bacterial communities
Shengjing Shi et al.
FEMS MICROBIOLOGY ECOLOGY (2011)
Massive parallel 16S rRNA gene pyrosequencing reveals highly diverse fecal bacterial and fungal communities in healthy dogs and cats
Stefanie Handl et al.
FEMS MICROBIOLOGY ECOLOGY (2011)
Desert Farming Benefits from Microbial Potential in Arid Soils and Promotes Diversity and Plant Health
Martina Koeberl et al.
PLOS ONE (2011)
Comparative Analysis of Bacterial Communities in a Potato Field as Determined by Pyrosequencing
Oezguel Inceoglu et al.
PLOS ONE (2011)
Responses of wind erosion to climate-induced vegetation changes on the Colorado Plateau
Seth M. Munson et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria
Rodrigo Mendes et al.
SCIENCE (2011)
Plant-Bacteria Association and Symbiosis: Are There Common Genomic Traits in Alphaproteobacteria?
Francesco Pini et al.
GENES (2011)
Search and clustering orders of magnitude faster than BLAST
Robert C. Edgar
BIOINFORMATICS (2010)
Are root exudates more important than other sources of rhizodeposits in structuring rhizosphere bacterial communities?
Paul G. Dennis et al.
FEMS MICROBIOLOGY ECOLOGY (2010)
Molecular characterization and in situ detection of bacterial communities associated with rhizosphere soil of high altitude native Poaceae from the Andean Puna region
Marcela A. Ferrero et al.
JOURNAL OF ARID ENVIRONMENTS (2010)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
Pyrosequencing reveals a contrasted bacterial diversity between oak rhizosphere and surrounding soil
Stephane Uroz et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2010)
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Patrick D. Schloss et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale
Christian L. Lauber et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Diversity of 16S-rRNA and nifH genes derived from rhizosphere soil and roots of an endemic drought tolerant grass, Lasiurus sindicus
Soumitra Paul Chowdhury et al.
EUROPEAN JOURNAL OF SOIL BIOLOGY (2009)
Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere
Gabriele Berg et al.
FEMS MICROBIOLOGY ECOLOGY (2009)
Influence of Arabidopsis thaliana accessions on rhizobacterial communities and natural variation in root exudates
Shirley A. Micallef et al.
JOURNAL OF EXPERIMENTAL BOTANY (2009)
Global Bathymetry and Elevation Data at 30 Arc Seconds Resolution: SRTM30_PLUS
J. J. Becker et al.
MARINE GEODESY (2009)
Rhizosphere microbial community structure at different maize plant growth stages and root locations
Lilia Cavaglieri et al.
MICROBIOLOGICAL RESEARCH (2009)
The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms
Jos M. Raaijmakers et al.
PLANT AND SOIL (2009)
Regulation and function of root exudates
Dayakar V. Badri et al.
PLANT CELL AND ENVIRONMENT (2009)
Bacterial communities in soybean rhizosphere in response to soil type, soybean genotype, and their growth stage
Yanxia Xu et al.
SOIL BIOLOGY & BIOCHEMISTRY (2009)
Plant age and genotype impact the progression of bacterial community succession in the Arabidopsis rhizosphere
Shirley A. Micallef et al.
PLANT SIGNALING & BEHAVIOR (2009)
Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP)
Scot E. Dowd et al.
BMC MICROBIOLOGY (2008)
Influence of plant developmental stage on microbial community structure and activity in the rhizosphere of three field crops
Ashley Houlden et al.
FEMS MICROBIOLOGY ECOLOGY (2008)
Plant host habitat and root exudates shape soil bacterial community structure
Feth el Zahar Haichar et al.
ISME JOURNAL (2008)
Stress tolerance in plants via habitat-adapted symbiosis
Rusty J. Rodriguez et al.
ISME JOURNAL (2008)
Arbuscular mycorrhizal fungi and rhizospheric bacteria diversity along an Altitudinal gradient in south American puna grassland
M. A. Lugo et al.
MICROBIAL ECOLOGY (2008)
Rhizosphere microbial community and its response to plant species and soil history
P. Garbeva et al.
PLANT AND SOIL (2008)
Bacterial diversity in hyperarid Atacama Desert soils
Stephanie A. Connon et al.
JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES (2007)
Influence of grass species and soil type on rhizosphere microbial community structure in grassland soils
Brajesh K. Singh et al.
APPLIED SOIL ECOLOGY (2007)
I will survive: DNA protection in bacterial spores
Peter Setlow
TRENDS IN MICROBIOLOGY (2007)
Bacterial community structure in the hyperarid core of the Atacama Desert, Chile
Kevin P. Drees et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Rhizosphere bacteria affected by transgenic potatoes with antibacterial activities compared with the effects of soil, wild-type potatoes, vegetation stage and pathogen exposure
F Rasche et al.
FEMS MICROBIOLOGY ECOLOGY (2006)
UniFrac: a new phylogenetic method for comparing microbial communities
C Lozupone et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Mars-like soils in the Atacama Desert, Chile, and the dry limit of microbial life
R Navarro-González et al.
SCIENCE (2003)
The role of root exudates and allelochemicals in the rhizosphere
C Bertin et al.
PLANT AND SOIL (2003)
Temperature and moisture conditions for life in the extreme arid region of the Atacama Desert:: Four years of observations including the El Nino of 1997-1998
CP McKay et al.
ASTROBIOLOGY (2003)
Origins of root-mediated pH changes in the rhizosphere and their responses to environmental constraints: A review
P Hinsinger et al.
PLANT AND SOIL (2003)
Microbial diversity and function in soil:: from genes to ecosystems
V Torsvik et al.
CURRENT OPINION IN MICROBIOLOGY (2002)
Variation of microbial communities in soil, rhizosphere, and rhizoplane in response to crop species, soil type, and crop development
G Wieland et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2001)