相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Evolutionary history of carbon monoxide dehydrogenase/acetyl-CoA synthase, one of the oldest enzymatic complexes
Panagiotis S. Adam et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Marsarchaeota are an aerobic archaeal lineage abundant in geothermal iron oxide microbial mats
Zackary J. Jay et al.
NATURE MICROBIOLOGY (2018)
IMG/M: integrated genome and metagenome comparative data analysis system
I-Min A. Chen et al.
NUCLEIC ACIDS RESEARCH (2017)
metaSPAdes: a new versatile metagenomic assembler
Sergey Nurk et al.
GENOME RESEARCH (2017)
Integrative modeling of gene and genome evolution roots the archaeal tree of life
Tom A. Williams et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
Microfluidic-based mini-metagenomics enables discovery of novel microbial lineages from complex environmental samples
Feigiao Brian Yu et al.
ELIFE (2017)
Discovery of extremely halophilic, methyl-reducing euryarchaea provides insights into the evolutionary origin of methanogenesis
Dimitry Y. Sorokin et al.
NATURE MICROBIOLOGY (2017)
Energy for two: New archaeal lineages and the origin of mitochondria
William F. Martin et al.
BIOESSAYS (2016)
Methanogenesis and the Wood-Ljungdahl Pathway: An Ancient, Versatile, and Fragile Association
Guillaume Borrel et al.
GENOME BIOLOGY AND EVOLUTION (2016)
Genomic reconstruction of a novel, deeply branched sediment archaeal phylum with pathways for acetogenesis and sulfur reduction
Kiley W. Seitz et al.
ISME JOURNAL (2016)
Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs
Emiley A. Eloe-Fadrosh et al.
NATURE COMMUNICATIONS (2016)
TruePrime is a novel method for whole-genome amplification from single cells based on TthPrimPol
Angel J. Picher et al.
NATURE COMMUNICATIONS (2016)
The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
Marcel Huntemann et al.
STANDARDS IN GENOMIC SCIENCES (2016)
Genomic inference of the metabolism of cosmopolitan subsurface Archaea, Hadesarchaea
Brett J. Baker et al.
NATURE MICROBIOLOGY (2016)
Genomic and enzymatic evidence for acetogenesis among multiple lineages of the archaeal phylum Bathyarchaeota widespread in marine sediments
Y. He et al.
NATURE MICROBIOLOGY (2016)
Methylotrophic methanogenesis discovered in the archaeal phylum Verstraetearchaeota
Inka Vanwonterghem et al.
NATURE MICROBIOLOGY (2016)
Metabolic traits of an uncultured archaeal lineage-MSBL1-from brine pools of the Red Sea
Romano Mwirichia et al.
SCIENTIFIC REPORTS (2016)
MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
Dinghua Li et al.
BIOINFORMATICS (2015)
Environmental controls on intragroup diversity of the uncultured benthic archaea of the miscellaneous Crenarchaeotal group lineage naturally enriched in anoxic sediments of the White Oak River estuary (North Carolina, USA)
Cassandre Sara Lazar et al.
ENVIRONMENTAL MICROBIOLOGY (2015)
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Donovan H. Parks et al.
GENOME RESEARCH (2015)
Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics
Paul N. Evans et al.
SCIENCE (2015)
New Mode of Energy Metabolism in the Seventh Order of Methanogens as Revealed by Comparative Genome Analysis of Candidatus Methanoplasma termitum
Kristina Lang et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
Lam-Tung Nguyen et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Multiobjective evolutionary algorithms to identify highly autocorrelated areas: the case of spatial distribution in financially compromised farms
Carlos R. Garcia-Alonso et al.
ANNALS OF OPERATIONS RESEARCH (2014)
Bioenergetics and anaerobic respiratory chains of aceticlastic methanogens
Cornelia Welte et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2014)
Biology of a widespread uncultivated archaeon that contributes to carbon fixation in the subsurface
Alexander J. Probst et al.
NATURE COMMUNICATIONS (2014)
Unique Characteristics of the Pyrrolysine System in the 7th Order of Methanogens: Implications for the Evolution of a Genetic Code Expansion Cassette
Guillaume Borrel et al.
ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL (2014)
Evolution of Na+ and H+ bioenergetics in methanogenic archaea
Katharina Schlegel et al.
BIOCHEMICAL SOCIETY TRANSACTIONS (2013)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
H2-Independent Growth of the Hydrogenotrophic Methanogen Methanococcus maripaludis
Kyle C. Costa et al.
MBIO (2013)
The Pfam protein families database
Marco Punta et al.
NUCLEIC ACIDS RESEARCH (2012)
Coupling of ferredoxin and heterodisulfide reduction via electron bifurcation in hydrogenotrophic methanogenic archaea
Anne-Kristin Kaster et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Autotrophic carbon fixation in archaea
Ivan A. Berg et al.
NATURE REVIEWS MICROBIOLOGY (2010)
Protein complexing in a methanogen suggests electron bifurcation and electron delivery from formate to heterodisulfide reductase
Kyle C. Costa et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutierrez et al.
BIOINFORMATICS (2009)
The global methane cycle: recent advances in understanding the microbial processes involved
Ralf Conrad
ENVIRONMENTAL MICROBIOLOGY REPORTS (2009)
Metabolic, phylogenetic, and ecological diversity of the methanogenic archaea
Yuchen Liu et al.
INCREDIBLE ANAEROBES: FROM PHYSIOLOGY TO GENOMICS TO FUELS (2008)
Methanogenic archaea: ecologically relevant differences in energy conservation
Rudolf K. Thauer et al.
NATURE REVIEWS MICROBIOLOGY (2008)
Coupled ferredoxin and crotonyl coenzyme a (CoA) reduction with NADH catalyzed by the butyryl-CoA dehydrogenase/Etf complex from Clostridium kluyveri
Fuli Li et al.
JOURNAL OF BACTERIOLOGY (2008)
Oceanic methane biogeochemistry
William S. Reeburgh
CHEMICAL REVIEWS (2007)
The origin and evolution of Archaea: a state of the art
Simonetta Gribaldo et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2006)
The genome sequence of Methanosphaera stadtmanae reveals why this human intestinal archaeon is restricted to methanol and H-2 for methane formation and ATP synthesis
WF Fricke et al.
JOURNAL OF BACTERIOLOGY (2006)
The COG database: a tool for genome-scale analysis of protein functions and evolution
RL Tatusov et al.
NUCLEIC ACIDS RESEARCH (2000)
KEGG: Kyoto Encyclopedia of Genes and Genomes
M Kanehisa et al.
NUCLEIC ACIDS RESEARCH (2000)
分享论文
