4.7 Article

Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Multidisciplinary Sciences

Evolution of antibiotic resistance is linked to any genetic mechanism affecting bacterial duration of carriage

Sonja Lehtinen et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)

Article Ecology

Frequency-dependent selection in vaccine-associated pneumococcal population dynamics

Jukka Corander et al.

NATURE ECOLOGY & EVOLUTION (2017)

Article Biochemistry & Molecular Biology

The Performance of the Date-Randomization Test in Phylogenetic Analyses of Time-Structured Virus Data

Sebastian Duchene et al.

MOLECULAR BIOLOGY AND EVOLUTION (2015)

Article Microbiology

ARG-ANNOT, a New Bioinformatic Tool To Discover Antibiotic Resistance Genes in Bacterial Genomes

Sushim Kumar Gupta et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2014)

Article Biochemical Research Methods

Prokka: rapid prokaryotic genome annotation

Torsten Seemann

BIOINFORMATICS (2014)

Article Biochemical Research Methods

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

Remco Bouckaert et al.

PLOS COMPUTATIONAL BIOLOGY (2014)

Article Microbiology

The Comprehensive Antibiotic Resistance Database

Andrew G. McArthur et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2013)

Article Immunology

Surface Charge of Streptococcus pneumoniae Predicts Serotype Distribution

Yuan Li et al.

INFECTION AND IMMUNITY (2013)

Article Biochemistry & Molecular Biology

The Adaptation of Temperate Bacteriophages to Their Host Genomes

Louis-Marie Bobay et al.

MOLECULAR BIOLOGY AND EVOLUTION (2013)

Article Biochemistry & Molecular Biology

Hierarchical and Spatially Explicit Clustering of DNA Sequences with BAPS Software

Lu Cheng et al.

MOLECULAR BIOLOGY AND EVOLUTION (2013)

Article Genetics & Heredity

Population genomics of post-vaccine changes in pneumococcal epidemiology

Nicholas J. Croucher et al.

NATURE GENETICS (2013)

Article Multidisciplinary Sciences

Multiple antigen-presenting system (MAPS) to induce comprehensive B- and T-cell immunity

Fan Zhang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Review Genetics & Heredity

Horizontal gene transfer and the evolution of bacterial and archaeal population structure

Martin F. Polz et al.

TRENDS IN GENETICS (2013)

Article Biochemical Research Methods

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

Anton Bankevich et al.

JOURNAL OF COMPUTATIONAL BIOLOGY (2012)

Article Microbiology

A High-Resolution View of Genome-Wide Pneumococcal Transformation

Nicholas J. Croucher et al.

PLOS PATHOGENS (2012)

Review Medicine, General & Internal

Serotype replacement in disease after pneumococcal vaccination

Daniel M. Weinberger et al.

LANCET (2011)

Article Multidisciplinary Sciences

Rapid Pneumococcal Evolution in Response to Clinical Interventions

Nicholas J. Croucher et al.

SCIENCE (2011)

Article Microbiology

An Unusual Pneumococcal Sequence Type Is the Predominant Cause of Serotype 3 Invasive Disease in South Africa

Kedibone M. Mothibeli et al.

JOURNAL OF CLINICAL MICROBIOLOGY (2010)

Article Biotechnology & Applied Microbiology

Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species

Claudio Donati et al.

GENOME BIOLOGY (2010)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Article Microbiology

Comparative Genomic Analysis of Ten Streptococcus pneumoniae Temperate Bacteriophages

Patricia Romero et al.

JOURNAL OF BACTERIOLOGY (2009)

Article Multidisciplinary Sciences

Hyper-Recombination, Diversity, and Antibiotic Resistance in Pneumococcus

William Paul Hanage et al.

SCIENCE (2009)

Article Biochemistry & Molecular Biology

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

Daniel R. Zerbino et al.

GENOME RESEARCH (2008)

Article Biochemistry & Molecular Biology

High rates of molecular evolution in hantaviruses

Cadhla Ramsden et al.

MOLECULAR BIOLOGY AND EVOLUTION (2008)

Article Genetics & Heredity

Characterization of Tn5386, a Tn916-related mobile element

Louis B. Rice et al.

PLASMID (2007)

Article Microbiology

Antibiotic-resistant invasive pneumococcal clones in Italy

Giovanni Gherardi et al.

JOURNAL OF CLINICAL MICROBIOLOGY (2007)

Article Immunology

Serotype competence and penicillin resistance in Streptococcus pneumoniae

Yu-Chia Hsieh et al.

EMERGING INFECTIOUS DISEASES (2006)

Article Biochemical Research Methods

RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees

A Stamatakis et al.

BIOINFORMATICS (2005)

Review Microbiology

Displaying the relatedness among isolates of bacterial species - the eBURST approach

BG Spratt et al.

FEMS MICROBIOLOGY LETTERS (2004)