相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。New roles in hemicellulosic sugar fermentation for the uncultivated Bacteroidetes family BS11
Lindsey M. Solden et al.
ISME JOURNAL (2017)
Host Genome Influence on Gut Microbial Composition and Microbial Prediction of Complex Traits in Pigs
Amelia Camarinha-Silva et al.
GENETICS (2017)
Differential effects of monensin and a blend of essential oils on rumen microbiota composition of transition dairy cows
M. Schaeren et al.
JOURNAL OF DAIRY SCIENCE (2017)
Host Genome Influence on Gut Microbial Composition and Microbial Prediction of Complex Traits in Pigs
Amelia Camarinha-Silva et al.
GENETICS (2017)
Application of meta-omics techniques to understand greenhouse gas emissions originating from ruminal metabolism
Robert J. Wallace et al.
GENETICS SELECTION EVOLUTION (2017)
Stool consistency is strongly associated with gut microbiota richness and composition, enterotypes and bacterial growth rates
Doris Vandeputte et al.
GUT (2016)
Compositional data analysis of the microbiome: fundamentals, tools, and challenges
Matthew C. B. Tsilimigras et al.
ANNALS OF EPIDEMIOLOGY (2016)
Medicinal herbs as a potential strategy to decrease methane production by rumen microbiota: a systematic evaluation with a focus on Perilla frutescens seed extract
Jiakun Wang et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2016)
Genetic Determinants of the Gut Microbiome in UK Twins
Julia K. Goodrich et al.
CELL HOST & MICROBE (2016)
Interchangeability between methane measurements in dairy cows assessed by comparing precision and agreement of two non-invasive infrared methods
G. F. Difford et al.
COMPUTERS AND ELECTRONICS IN AGRICULTURE (2016)
Phylogenetic network analysis applied to pig gut microbiota identifies an ecosystem structure linked with growth traits
Yuliaxis Ramayo-Caldas et al.
ISME JOURNAL (2016)
Genetic and phenotypic variance and covariance components for methane emission and postweaning traits in Angus cattle
K. A. Donoghue et al.
JOURNAL OF ANIMAL SCIENCE (2016)
Heritability estimates for enteric methane emissions from Holstein cattle measured using noninvasive methods
Jan Lassen et al.
JOURNAL OF DAIRY SCIENCE (2016)
Population-level analysis of gut microbiome variation
Gwen Falony et al.
SCIENCE (2016)
Measuring Methane Procuction from Ruminants
Julian Hill et al.
TRENDS IN BIOTECHNOLOGY (2016)
Genetic and genomic relationship between methane production measured in breath and fatty acid content in milk samples from Danish Holsteins
J. Lassen et al.
ANIMAL PRODUCTION SCIENCE (2016)
Bovine Host Genetic Variation Influences Rumen Microbial Methane Production with Best Selection Criterion for Low Methane Emitting and Efficiently Feed Converting Hosts Based on Metagenomic Gene Abundance
Rainer Roehe et al.
PLOS GENETICS (2016)
Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
Janine Kamke et al.
MICROBIOME (2016)
Colonic transit time is related to bacterial metabolism and mucosal turnover in the gut
Henrik M. Roager et al.
NATURE MICROBIOLOGY (2016)
Ruminal Bacterial Community Composition in Dairy Cows Is Dynamic over the Course of Two Lactations and Correlates with Feed Efficiency
Kelsea A. Jewell et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)
Genetic and environmental control of host-gut microbiota interactions
Elin Org et al.
GENOME RESEARCH (2015)
Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes
Seth R. Bordenstein et al.
PLOS BIOLOGY (2015)
Prepartum and Postpartum Rumen Fluid Microbiomes: Characterization and Correlation with Production Traits in Dairy Cows
Fabio S. Lima et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)
Inter-phylum HGT has shaped the metabolism of many mesophilic and anaerobic bacteria
Alejandro Caro-Quintero et al.
ISME JOURNAL (2015)
Comparative genomics highlights the unique biology of Methanomassiliicoccales, a Thermoplasmatales-related seventh order of methanogenic archaea that encodes pyrrolysine
Guillaume Borrel et al.
BMC GENOMICS (2014)
Low-methane yield sheep have smaller rumens and shorter rumen retention time
John P. Goopy et al.
BRITISH JOURNAL OF NUTRITION (2014)
Human Genetics Shape the Gut Microbiome
Julia K. Goodrich et al.
CELL (2014)
Rethinking Enterotypes
Dan Knights et al.
CELL HOST & MICROBE (2014)
Methane yield phenotypes linked to differential gene expression in the sheep rumen microbiome
Weibing Shi et al.
GENOME RESEARCH (2014)
Invited review: Enteric methane in dairy cattle production: Quantifying the opportunities and impact of reducing emissions
J. R. Knapp et al.
JOURNAL OF DAIRY SCIENCE (2014)
Two Different Bacterial Community Types Are Linked with the Low-Methane Emission Trait in Sheep
Sandra Kittelmann et al.
PLOS ONE (2014)
LotuS: an efficient and user-friendly OTU processing pipeline
Falk Hildebrand et al.
MICROBIOME (2014)
Host genetics and diet, but not immunoglobulin A expression, converge to shape compositional features of the gut microbiome in an advanced intercross population of mice
Larry J. Leamy et al.
GENOME BIOLOGY (2014)
SPECIAL TOPICS-Mitigation of methane and nitrous oxide emissions from animal operations: I. A review of enteric methane mitigation options
A. N. Hristov et al.
JOURNAL OF ANIMAL SCIENCE (2013)
Richness of human gut microbiome correlates with metabolic markers
Emmanuelle Le Chatelier et al.
NATURE (2013)
UPARSE: highly accurate OTU sequences from microbial amplicon reads
Robert C. Edgar
NATURE METHODS (2013)
Candidatus Methanogranum caenicola: a Novel Methanogen from the Anaerobic Digested Sludge, and Proposal of Methanomassiliicoccaceae fam. nov and Methanomassiliicoccales ord. nov., for a Methanogenic Lineage of the Class Thermoplasmata
Takao Iino et al.
MICROBES AND ENVIRONMENTS (2013)
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
Anna Klindworth et al.
NUCLEIC ACIDS RESEARCH (2013)
Metagenomic Predictions: From Microbiome to Complex Health and Environmental Phenotypes in Humans and Cattle
Elizabeth M. Ross et al.
PLOS ONE (2013)
Inflammation-associated enterotypes, host genotype, cage and inter-individual effects drive gut microbiota variation in common laboratory mice
Falk Hildebrand et al.
GENOME BIOLOGY (2013)
Future methane, hydroxyl, and their uncertainties: key climate and emission parameters for future predictions
C. D. Holmes et al.
ATMOSPHERIC CHEMISTRY AND PHYSICS (2013)
High throughput whole rumen metagenome profiling using untargeted massively parallel sequencing
Elizabeth M. Ross et al.
BMC GENETICS (2012)
Factors associated with ruminal pH at herd level
T. Geishauser et al.
JOURNAL OF DAIRY SCIENCE (2012)
Accuracy of noninvasive breath methane measurements using Fourier transform infrared methods on individual cows
J. Lassen et al.
JOURNAL OF DAIRY SCIENCE (2012)
On-farm methane measurements during milking correlate with total methane production by individual dairy cows
P. C. Garnsworthy et al.
JOURNAL OF DAIRY SCIENCE (2012)
The Chimeric Genome of Sphaerochaeta: Nonspiral Spirochetes That Break with the Prevalent Dogma in Spirochete Biology
A. Caro-Quintero et al.
MBIO (2012)
Chimpanzees and humans harbour compositionally similar gut enterotypes
Andrew H. Moeller et al.
NATURE COMMUNICATIONS (2012)
UCHIME improves sensitivity and speed of chimera detection
Robert C. Edgar et al.
BIOINFORMATICS (2011)
FLASH: fast length adjustment of short reads to improve genome assemblies
Tanja Magoc et al.
BIOINFORMATICS (2011)
Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
Fabian Sievers et al.
MOLECULAR SYSTEMS BIOLOGY (2011)
Enterotypes of the human gut microbiome
Manimozhiyan Arumugam et al.
NATURE (2011)
Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes
Gary D. Wu et al.
SCIENCE (2011)
Composition, spatial distribution, and diversity of the bacterial communities in the rumen of cows fed different forages
Yunhong Kong et al.
FEMS MICROBIOLOGY ECOLOGY (2010)
Mitigation of enteric methane emissions through improving efficiency of energy utilization and productivity in lactating dairy cows
T. Yan et al.
JOURNAL OF DAIRY SCIENCE (2010)
Host specificity of the ruminal bacterial community in the dairy cow following near-total exchange of ruminal contents
P. J. Weimer et al.
JOURNAL OF DAIRY SCIENCE (2010)
Methane and carbon dioxide ratio in excreted air for quantification of the methane production from ruminants
J. Madsen et al.
LIVESTOCK SCIENCE (2010)
FastTree 2-Approximately Maximum-Likelihood Trees for Large Alignments
Morgan N. Price et al.
PLOS ONE (2010)
Structure of the archaeal community of the rumen
Peter H. Janssen et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Redirecting rumen fermentation to reduce methanogenesis
T. A. McAllister et al.
AUSTRALIAN JOURNAL OF EXPERIMENTAL AGRICULTURE (2008)
Role of microorganisms in the evolution of animals and plants: the hologenome theory of evolution
Ilana Zilber-Rosenberg et al.
FEMS MICROBIOLOGY REVIEWS (2008)
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
Qiong Wang et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
A unified mixed-model method for association mapping that accounts for multiple levels of relatedness
JM Yu et al.
NATURE GENETICS (2006)
Mitigation strategies to reduce enteric methane emissions from dairy cows:: Update review
D Boadi et al.
CANADIAN JOURNAL OF ANIMAL SCIENCE (2004)
Methane production by ruminants: its contribution to global warming
AR Moss et al.
ANNALES DE ZOOTECHNIE (2000)
分享论文
