4.8 Article

Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Microfluidic isoform sequencing shows widespread splicing coordination in the human transcriptome

Hagen Tilgner et al.

GENOME RESEARCH (2018)

Article Biotechnology & Applied Microbiology

Multiplexed droplet single-cell RNA-sequencing using natural genetic variation

Hyun Min Kang et al.

NATURE BIOTECHNOLOGY (2018)

Article Genetics & Heredity

Annotation-free quantification of RNA splicing using LeafCutter

Yang I. Li et al.

NATURE GENETICS (2018)

Article Biotechnology & Applied Microbiology

Nanopore sequencing and assembly of a human genome with ultra-long reads

Miten Jain et al.

NATURE BIOTECHNOLOGY (2018)

Article Biotechnology & Applied Microbiology

Full-length mRNA sequencing uncovers a widespread coupling between transcription initiation and mRNA processing

Seyed Yahya Anvar et al.

GENOME BIOLOGY (2018)

Article Multidisciplinary Sciences

Massively parallel digital transcriptional profiling of single cells

Grace X. Y. Zheng et al.

NATURE COMMUNICATIONS (2017)

Article Biotechnology & Applied Microbiology

Single-cell mRNA isoform diversity in the mouse brain

Kasper Karlsson et al.

BMC GENOMICS (2017)

Article Biochemistry & Molecular Biology

Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation

Nuala A. O'Leary et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Biotechnology & Applied Microbiology

Spatial reconstruction of single-cell gene expression data

Rahul Satija et al.

NATURE BIOTECHNOLOGY (2015)

Article Neurosciences

Cell type- and brain region-resolved mouse brain proteome

Kirti Sharma et al.

NATURE NEUROSCIENCE (2015)

Article Multidisciplinary Sciences

A survey of human brain transcriptome diversity at the single cell level

Spyros Darmanis et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Article Multidisciplinary Sciences

Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq

Amit Zeisel et al.

SCIENCE (2015)

Article Biotechnology & Applied Microbiology

Determining exon connectivity in complex mRNAs by nanopore sequencing

Mohan T. Bolisetty et al.

GENOME BIOLOGY (2015)

Review Developmental Biology

Development of the cerebellum: simple steps to make a 'little brain'

Thomas Butts et al.

DEVELOPMENT (2014)

Article Biochemical Research Methods

Full-length RNA-seq from single cells using Smart-seq2

Simone Picelli et al.

NATURE PROTOCOLS (2014)

Article Biochemistry & Molecular Biology

The UCSC Genome Browser database: 2014 update

Donna Karolchik et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Multidisciplinary Sciences

Defining a personal, allele-specific, and single-molecule long-read transcriptome

Hagen Tilgner et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Multidisciplinary Sciences

Cartography of neurexin alternative splicing mapped by single-molecule long-read mRNA sequencing

Barbara Treutlein et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Multidisciplinary Sciences

Massively Parallel Single-Cell RNA-Seq for Marker-Free Decomposition of Tissues into Cell Types

Diego Adhemar Jaitin et al.

SCIENCE (2014)

Article Biochemical Research Methods

STAR: ultrafast universal RNA-seq aligner

Alexander Dobin et al.

BIOINFORMATICS (2013)

Article Biotechnology & Applied Microbiology

A single-molecule long-read survey of the human transcriptome

Donald Sharon et al.

NATURE BIOTECHNOLOGY (2013)

Article Multidisciplinary Sciences

Characterization of the human ESC transcriptome by hybrid sequencing

Kin Fai Au et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Genetics & Heredity

Accurate Identification and Analysis of Human mRNA Isoforms Using Deep Long Read Sequencing

Hagen Tilgner et al.

G3-GENES GENOMES GENETICS (2013)

Article Biochemistry & Molecular Biology

GENCODE: The reference human genome annotation for The ENCODE Project

Jennifer Harrow et al.

GENOME RESEARCH (2012)

Article Biotechnology & Applied Microbiology

Hybrid error correction and de novo assembly of single-molecule sequencing reads

Sergey Koren et al.

NATURE BIOTECHNOLOGY (2012)

Article Multidisciplinary Sciences

Global analysis of trans-splicing in Drosophila

C. Joel McManus et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Biochemistry & Molecular Biology

The gene encoding the splicing factor SF2/ASF is a proto-oncogene

Rotem Karni et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2007)

Article Multidisciplinary Sciences

Genome-wide atlas of gene expression in the adult mouse brain

Ed S. Lein et al.

NATURE (2007)

Article Biotechnology & Applied Microbiology

Functional coordination of alternative splicing in the mammalian central nervous system

Matthew Fagnani et al.

GENOME BIOLOGY (2007)

Article Biochemistry & Molecular Biology

A polar mechanism coordinates different regions of alternative splicing within a single gene

JP Fededa et al.

MOLECULAR CELL (2005)

Article Biochemical Research Methods

GMAP: a genomic mapping and alignment program for mRNA and EST sequences

TD Wu et al.

BIOINFORMATICS (2005)

Review Multidisciplinary Sciences

Initial sequencing and comparative analysis of the mouse genome

RH Waterston et al.

NATURE (2002)