4.8 Article

Genetic basis for the establishment of endosymbiosis in Paramecium

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation

Sergey Koren et al.

GENOME RESEARCH (2017)

Article Biochemistry & Molecular Biology

The Macronuclear Genome of Stentor coeruleus Reveals Tiny Introns in a Giant Cell

Mark M. Slabodnick et al.

CURRENT BIOLOGY (2017)

Article Biochemistry & Molecular Biology

Shining a Light on Exploitative Host Control in a Photosynthetic Endosymbiosis

Christopher D. Lowe et al.

CURRENT BIOLOGY (2016)

Article Evolutionary Biology

Different Endosymbiotic Interactions in Two Hydra Species Reflect the Evolutionary History of Endosymbiosis

Masakazu Ishikawa et al.

GENOME BIOLOGY AND EVOLUTION (2016)

Article Biology

Host control and nutrient trading in a photosynthetic symbiosis

Andrew D. Dean et al.

JOURNAL OF THEORETICAL BIOLOGY (2016)

Article Biochemistry & Molecular Biology

Two-step evolution of endosymbiosis between hydra and algae

Masakazu Ishikawa et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2016)

Article Biotechnology & Applied Microbiology

A novel codon-based de Bruijn graph algorithm for gene construction from unassembled transcriptomes

Gongxin Peng et al.

GENOME BIOLOGY (2016)

Article Biochemistry & Molecular Biology

Phylogenomic analyses reveal subclass Scuticociliatia as the sister group of subclass Hymenostomatia within class Oligohymenophorea

Jin-Mei Feng et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2015)

Article Cell Biology

Phylogenomics of non-model ciliates based on transcriptomic analyses

Xiao Chen et al.

PROTEIN & CELL (2015)

Article Plant Sciences

Starch and sugar accumulation in Sulla carnosa leaves upon Mg2+ starvation

Nejia Farhat et al.

ACTA PHYSIOLOGIAE PLANTARUM (2014)

Article Biochemical Research Methods

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony M. Bolger et al.

BIOINFORMATICS (2014)

Article Biotechnology & Applied Microbiology

Comparison of gene expression of Paramecium bursaria with and without Chlorella variabilis symbionts

Yuuki Kodama et al.

BMC GENOMICS (2014)

Article Multidisciplinary Sciences

Lipid Accumulation during the Establishment of Kleptoplasty in Elysia chlorotica

Karen N. Pelletreau et al.

PLOS ONE (2014)

Article Biotechnology & Applied Microbiology

GET_HOMOLOGUES, a Versatile Software Package for Scalable and Robust Microbial Pangenome Analysis

Bruno Contreras-Moreira et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)

Article Biochemistry & Molecular Biology

Symbiosis between hydra and chlorella: Molecular phylogenetic analysis and experimental study provide insight into its origin and evolution

Hitomi Kawaida et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2013)

Article Multidisciplinary Sciences

Structural basis for the drug extrusion mechanism by a MATE multidrug transporter

Yoshiki Tanaka et al.

NATURE (2013)

Article Biochemistry & Molecular Biology

The Oxytricha trifallax Macronuclear Genome: A Complex Eukaryotic Genome with 16,000 Tiny Chromosomes

Estienne C. Swart et al.

PLOS BIOLOGY (2013)

Article Microbiology

Endosymbionts in Paramecium

Masahiro Fujishima et al.

EUROPEAN JOURNAL OF PROTISTOLOGY (2012)

Article Biochemical Research Methods

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

Cole Trapnell et al.

NATURE PROTOCOLS (2012)

Article Biochemical Research Methods

ProtTest 3: fast selection of best-fit models of protein evolution

Diego Darriba et al.

BIOINFORMATICS (2011)

Review Microbiology

Mixotrophy in Ciliates

Genoveva F. Esteban et al.

PROTIST (2010)

Article Biochemical Research Methods

TopHat: discovering splice junctions with RNA-Seq

Cole Trapnell et al.

BIOINFORMATICS (2009)

Article Biochemistry & Molecular Biology

Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training

Vardges Ter-Hovhannisyan et al.

GENOME RESEARCH (2008)

Article Genetics & Heredity

A model of globin evolution

Serge N. Vinogradov et al.

Article Biochemical Research Methods

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genornes

Genis Parra et al.

BIOINFORMATICS (2007)

Article Biochemical Research Methods

RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

Alexandros Stamatakis

BIOINFORMATICS (2006)

Article Biochemistry & Molecular Biology

WEGO: a web tool for plotting GO annotations

Jia Ye et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Biochemical Research Methods

Automated generation of heuristics for biological sequence comparison

GS Slater et al.

BMC BIOINFORMATICS (2005)

Article Biochemistry & Molecular Biology

MAFFT version 5: improvement in accuracy of multiple sequence alignment

K Katoh et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Biochemistry & Molecular Biology

Mauve: Multiple alignment of conserved genomic sequence with rearrangements

ACE Darling et al.

GENOME RESEARCH (2004)

Article Biochemistry & Molecular Biology

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

J Castresana

MOLECULAR BIOLOGY AND EVOLUTION (2000)