相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Intestinal Colonization Traits of Pandemic Multidrug-Resistant Escherichia coli ST131
Sohinee Sarkar et al.
JOURNAL OF INFECTIOUS DISEASES (2018)
Development of a Web Tool for Escherichia coli Subtyping Based on fimH Alleles
Louise Roer et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2017)
Impact of CD4+T Cell Responses on Clinical Outcome following Oral Administration of Wild-Type Enterotoxigenic Escherichia coli in Humans
Monica A. McArthur et al.
PLOS NEGLECTED TROPICAL DISEASES (2017)
The Pandemic H30 Subclone of Sequence Type 131 (ST131) as the Leading Cause of Multidrug-Resistant Escherichia coli Infections in the United States (2011-2012)
James R. Johnson et al.
OPEN FORUM INFECTIOUS DISEASES (2017)
Epidemic Emergence in the United States of Escherichia coli Sequence Type 131-H30 (ST131-H30), 2000 to 2009
James R. Johnson et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2017)
The ST131 Escherichia coli H22 subclone from human intestinal microbiota: Comparison of genomic and phenotypic traits with those of the globally successful H30 subclone
Marie-Helene Nicolas-Chanoine et al.
BMC MICROBIOLOGY (2017)
The different ecological niches of enterotoxigenic Escherichia coli
Lucia Gonzales-Siles et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
Prolonged colonisation with Escherichia coli O25: ST131 versus other extended-spectrum beta-lactamase-producing E. coli in a long-term care facility with high endemic level of rectal colonisation, the Netherlands, 2013 to 2014
I. Overdevest et al.
EUROSURVEILLANCE (2016)
Antibiotics and the Human Gut Microbiome: Dysbiosesand Accumulation of Resistances
M. P. Francino
FRONTIERS IN MICROBIOLOGY (2016)
In silico serotyping of E. coli from short read data identifies limited novel O-loci but extensive diversity of O:H serotype combinations within and between pathogenic lineages
Danielle J. Ingle et al.
MICROBIAL GENOMICS (2016)
Comparative Genomics Provides Insight into the Diversity of the Attaching and Effacing Escherichia coli Virulence Plasmids
Tracy H. Hazen et al.
INFECTION AND IMMUNITY (2015)
Rapid and Easy In Silico Serotyping of Escherichia coli Isolates by Use of Whole-Genome Sequencing Data
Katrine G. Joensen et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2015)
Defining the Phylogenomics of Shigella Species: a Pathway to Diagnostics
Jason W. Sahl et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2015)
Escherichia coli diversity in the lower intestinal tract of humans
David M. Gordon et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2015)
Gut Microbial Succession Follows Acute Secretory Diarrhea in Humans
Lawrence A. David et al.
MBIO (2015)
Examination of the Enterotoxigenic Escherichia coli Population Structure during Human Infection
Jason W. Sahl et al.
MBIO (2015)
Bacterial Factors Associated with Lethal Outcome of Enteropathogenic Escherichia coli Infection: Genomic Case-Control Studies
Michael S. Donnenberg et al.
PLOS NEGLECTED TROPICAL DISEASES (2015)
Commensal and Pathogenic Escherichia coli Metabolism in the Gut
Tyrrell Conway et al.
MICROBIOLOGY SPECTRUM (2015)
A New Clone Sweeps Clean: the Enigmatic Emergence of Escherichia coli Sequence Type 131
Ritu Banerjee et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2014)
Escherichia coli ST131, an Intriguing Clonal Group
Marie-Helene Nicolas-Chanoine et al.
CLINICAL MICROBIOLOGY REVIEWS (2014)
Escherichia coli Pathotypes Occupy Distinct Niches in the Mouse Intestine
Jessica P. Meador et al.
INFECTION AND IMMUNITY (2014)
Molecular and Functional Profiling of the Polyamine Content in Enteroinvasive E. coli: Looking into the Gap between Commensal E. coli and Harmful Shigella
Rosaria Campilongo et al.
PLOS ONE (2014)
The large-scale blast score ratio (LS-BSR) pipeline: a method to rapidly compare genetic content between bacterial genomes
Jason W. Sahl et al.
PEERJ (2014)
The MaSuRCA genome assembler
Aleksey V. Zimin et al.
BIOINFORMATICS (2013)
Recent Advances in Understanding Enteric Pathogenic Escherichia coli
Matthew A. Croxen et al.
CLINICAL MICROBIOLOGY REVIEWS (2013)
Burden and aetiology of diarrhoeal disease in infants and young children in developing countries (the Global Enteric Multicenter Study, GEMS): a prospective, case-control study
Karen L. Kotloff et al.
LANCET (2013)
Refining the pathovar paradigm via phylogenomics of the attaching and effacing Escherichia coli
Tracy H. Hazen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Commensal Escherichia coli strains in Guiana reveal a high genetic diversity with host-dependant population structure
Mathilde Lescat et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2013)
The Global Enteric Multicenter Study (GEMS) of Diarrheal Disease in Infants and Young Children in Developing Countries: Epidemiologic and Clinical Methods of the Case/Control Study
Karen L. Kotloff et al.
CLINICAL INFECTIOUS DISEASES (2012)
The CTX-M-15-Producing Escherichia coli Clone O25b: H4-ST131 Has High Intestine Colonization and Urinary Tract Infection Abilities
Sophie Vimont et al.
PLOS ONE (2012)
Fundamentals of microbial community resistance and resilience
Ashley Shade et al.
FRONTIERS IN MICROBIOLOGY (2012)
RNA-Seq analysis in MeV
Eleanor A. Howe et al.
BIOINFORMATICS (2011)
Colonization of Returning Travelers With CTX-M-Producing Escherichia coli
Gisele Peirano et al.
JOURNAL OF TRAVEL MEDICINE (2011)
A systematic review of experimental infections with enterotoxigenic Escherichia coli (ETEC)
Chad K. Porter et al.
VACCINE (2011)
The IGS Standard Operating Procedure for Automated Prokaryotic Annotation
Kevin Galens et al.
STANDARDS IN GENOMIC SCIENCES (2011)
Foreign Travel Is a Major Risk Factor for Colonization with Escherichia coli Producing CTX-M-Type Extended-Spectrum β-Lactamases: a Prospective Study with Swedish Volunteers
Thomas Tangden et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2010)
Ergatis: a web interface and scalable software system for bioinformatics workflows
Joshua Orvis et al.
BIOINFORMATICS (2010)
A Commensal Gone Bad: Complete Genome Sequence of the Prototypical Enterotoxigenic Escherichia coli Strain H10407
Lisa C. Crossman et al.
JOURNAL OF BACTERIOLOGY (2010)
The population genetics of commensal Escherichia coli
Olivier Tenaillon et al.
NATURE REVIEWS MICROBIOLOGY (2010)
Origins and Evolution of Antibiotic Resistance
Julian Davies et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2010)
Comparison of carbon nutrition for pathogenic and commensal Escherichia coli strains in the mouse intestine
Andrew J. Fabich et al.
INFECTION AND IMMUNITY (2008)
Intercontinental emergence of Escherichia coli clone O25:H4-ST131 producing CTX-M-15
Marie-Helene Nicolas-Chanoine et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2008)
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
Alexandros Stamatakis
BIOINFORMATICS (2006)
Identification of forces shaping the commensal Escherichia coli genetic structure by comparing animal and human isolates
Patricia Escobar-Paramo et al.
ENVIRONMENTAL MICROBIOLOGY (2006)
Sex and virulence in Escherichia coli:: an evolutionary perspective
Thierry Wirth et al.
MOLECULAR MICROBIOLOGY (2006)
Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli:: A comparative genomics approach
SL Chen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Reduction of Escherichia coli O157:H7 populations in cattle by addition of colicin E7-producing E-coli to feed
GP Schamberger et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)
The genetic structure of Escherichia coli populations in primary and secondary habitats
DM Gordon et al.
MICROBIOLOGY-SGM (2002)
Escherichia coli strains colonising the gastrointestinal tract protect germfree mice against Salmonella typhimurium infection
S Hudault et al.
GUT (2001)
分享论文
