相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Regulation of DNA methylation on EEF1D and RPL8 expression in cattle
Xuan Liu et al.
GENETICA (2017)
MiR-139 suppresses β-casein synthesis and proliferation in bovine mammary epithelial cells by targeting the GHR and IGF1R signaling pathways
Yingjun Cui et al.
BMC VETERINARY RESEARCH (2017)
Putative enhancer sites in the bovine genome are enriched with variants affecting complex traits
Min Wang et al.
GENETICS SELECTION EVOLUTION (2017)
Identification and characterization of long intergenic noncoding RNAs in bovine mammary glands
Chao Tong et al.
BMC GENOMICS (2017)
Genome-wide analysis of long non-coding RNAs at early stage of skin pigmentation in goats (Capra hircus)
Hangxing Ren et al.
BMC GENOMICS (2016)
Comparative Analysis of the miRNome of Bovine Milk Fat, Whey and Cells
Ran Li et al.
PLOS ONE (2016)
Systematic microRNAome profiling reveals the roles of microRNAs in milk protein metabolism and quality: insights on low-quality forage utilization
Diming Wang et al.
SCIENTIFIC REPORTS (2016)
RNA-Seq reveals 10 novel promising candidate genes affecting milk protein concentration in the Chinese Holstein population
Cong Li et al.
SCIENTIFIC REPORTS (2016)
TransComb: genome-guided transcriptome assembly via combing junctions in splicing graphs
Juntao Liu et al.
GENOME BIOLOGY (2016)
miR-135a Targets and Regulates Prolactin Receptor Gene in Goat Mammary Epithelial Cells
Zhibin Ji et al.
DNA AND CELL BIOLOGY (2015)
DNMT1-associated long non-coding RNAs regulate global gene expression and DNA methylation in colon cancer
Callie R. Merry et al.
HUMAN MOLECULAR GENETICS (2015)
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
Mihaela Pertea et al.
NATURE BIOTECHNOLOGY (2015)
Long Noncoding RNAs: A New Regulatory Code in Metabolic Control
Xu-Yun Zhao et al.
TRENDS IN BIOCHEMICAL SCIENCES (2015)
The conservation and signatures of lincRNAs in Marek's disease of chicken
Yanghua He et al.
SCIENTIFIC REPORTS (2015)
MiR-486 Regulates Lactation and Targets the PTEN Gene in Cow Mammary Glands
Dan Li et al.
PLOS ONE (2015)
Causal analysis approaches in Ingenuity Pathway Analysis
Andreas Kraemer et al.
BIOINFORMATICS (2014)
Where long noncoding RNAs meet DNA methylation
Fan Lai et al.
CELL RESEARCH (2014)
Genome-Wide Identification of Long Intergenic Noncoding RNA Genes and Their Potential Association with Domestication in Pigs
Zhong-Yin Zhou et al.
GENOME BIOLOGY AND EVOLUTION (2014)
MicroRNA-152 Regulates DNA Methyltransferase 1 and Is Involved in the Development and Lactation of Mammary Glands in Dairy Cows
Jie Wang et al.
PLOS ONE (2014)
DNA Methylation and Transcription in a Distal Region Upstream from the Bovine AlphaS1 Casein Gene after Once or Twice Daily Milking
Minh Nguyen et al.
PLOS ONE (2014)
Gene regulation by the act of long non-coding RNA transcription
Aleksandra E. Kornienko et al.
BMC BIOLOGY (2013)
Identification of novel transcripts and noncoding RNAs in bovine skin by deep next generation sequencing
Rosemarie Weikard et al.
BMC GENOMICS (2013)
Long non-coding RNA H19 increases bladder cancer metastasis by associating with EZH2 and inhibiting E-cadherin expression
Ming Luo et al.
CANCER LETTERS (2013)
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
Daehwan Kim et al.
GENOME BIOLOGY (2013)
Epigenetics: a possible role in acute and transgenerational regulation of dairy cow milk production
K. Singh et al.
ANIMAL (2012)
Genome Regulation by Long Noncoding RNAs
John L. Rinn et al.
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 81 (2012)
Identification and Properties of 1,119 Candidate LincRNA Loci in the Drosophila melanogaster Genome
Robert S. Young et al.
GENOME BIOLOGY AND EVOLUTION (2012)
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis
Andrea Pauli et al.
GENOME RESEARCH (2012)
The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
Thomas Derrien et al.
GENOME RESEARCH (2012)
Identification of long non-protein coding RNAs in chicken skeletal muscle using next generation sequencing
Tingting Li et al.
GENOMICS (2012)
Technical note: Identification of reference genes for gene expression studies in different bovine tissues focusing on different fat depots
B. Saremi et al.
JOURNAL OF DAIRY SCIENCE (2012)
MiR-15a Decreases Bovine Mammary Epithelial Cell Viability and Lactation and Regulates Growth Hormone Receptor Expression
Hui-Ming Li et al.
MOLECULES (2012)
The H19 lincRNA is a developmental reservoir of miR-675 that suppresses growth and lgf1r
Andrew Keniry et al.
NATURE CELL BIOLOGY (2012)
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
Cole Trapnell et al.
NATURE PROTOCOLS (2012)
Cis-acting noncoding RNAs: friends and foes
Sonia Guil et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2012)
Bovine ncRNAs Are Abundant, Primarily Intergenic, Conserved and Associated with Regulatory Genes
Zhipeng Qu et al.
PLOS ONE (2012)
Computational analysis of functional long noncoding RNAs reveals lack of peptide-coding capacity and parallels with 3′ UTRs
Farshad Niazi et al.
RNA (2012)
ER and PR signaling nodes during mammary gland development
Tamara Tanos et al.
BREAST CANCER RESEARCH (2012)
Exploring the gonad transcriptome of two extreme male pigs with RNA-seq
Anna Esteve-Codina et al.
BMC GENOMICS (2011)
A Long Noncoding RNA Controls Muscle Differentiation by Functioning as a Competing Endogenous RNA
Marcella Cesana et al.
CELL (2011)
Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
Moran N. Cabili et al.
GENES & DEVELOPMENT (2011)
HMMER web server: interactive sequence similarity searching
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2011)
Transcriptome Profiling of Bovine Milk Oligosaccharide Metabolism Genes Using RNA-Sequencing
Saumya Wickramasinghe et al.
PLOS ONE (2011)
IGF-1 stimulates protein synthesis by enhanced signaling through mTORC1 in bovine mammary epithelial cells
S. A. Burgos et al.
DOMESTIC ANIMAL ENDOCRINOLOGY (2010)
Insulin, a key regulator of hormone responsive milk protein synthesis during lactogenesis in murine mammary explants
Karensa K. Menzies et al.
FUNCTIONAL & INTEGRATIVE GENOMICS (2010)
Association of polymorphisms in exons 2 and 10 of the insulin-like growth factor 2 (IGF2) gene with milk production traits in Polish Holstein-Friesian cattle
Emilia Bagnicka et al.
JOURNAL OF DAIRY RESEARCH (2010)
SNP discovery in the bovine milk transcriptome using RNA-Seq technology
Angela Canovas et al.
MAMMALIAN GENOME (2010)
Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs
Mitchell Guttman et al.
NATURE BIOTECHNOLOGY (2010)
Evolution and Functions of Long Noncoding RNAs
Chris P. Ponting et al.
CELL (2009)
A microRNA, miR-101a, controls mammary gland development by regulating cyclooxygenase-2 expression
Tetsuya Tanaka et al.
DIFFERENTIATION (2009)
Genome-wide association analysis in domestic animals: a powerful approach for genetic dissection of trait loci
Leif Andersson
GENETICA (2009)
Circos: An information aesthetic for comparative genomics
Martin Krzywinski et al.
GENOME RESEARCH (2009)
Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
Mitchell Guttman et al.
NATURE (2009)
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
Da Wei Huang et al.
NATURE PROTOCOLS (2009)
Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression
Ahmad M. Khalil et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Kcnq1ot1 Antisense Noncoding RNA Mediates Lineage-Specific Transcriptional Silencing through Chromatin-Level Regulation
Radha Raman Pandey et al.
MOLECULAR CELL (2008)
Polycomb Proteins Targeted by a Short Repeat RNA to the Mouse X Chromosome
Jing Zhao et al.
SCIENCE (2008)
Differentiating Protein-Coding and Noncoding RNA: Challenges and Ambiguities
Marcel E. Dinger et al.
PLOS COMPUTATIONAL BIOLOGY (2008)
The Pfam protein families database
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2008)
Functional demarcation of active and silent chromatin domains in human HOX loci by Noncoding RNAs
John L. Rinn et al.
CELL (2007)
The imprinted H19 noncoding RNA is a primary microRNA precursor
Xuezhong Cai et al.
RNA (2007)
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
A Siepel et al.
GENOME RESEARCH (2005)
A comparison of the composition, coagulation characteristics and cheesemaking capacity of milk from Friesian and Jersey dairy cows
MJ Auldist et al.
JOURNAL OF DAIRY RESEARCH (2004)
BLAST: at the core of a powerful and diverse set of sequence analysis tools
S McGinnis et al.
NUCLEIC ACIDS RESEARCH (2004)
Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)
Real-time RT-PCR quantification of insulin-like growth factor (IGF)-1, IGF-1 receptor, IGF-2, IGF-2 receptor, insulin receptor, growth hormone receptor, IGF-binding proteins 1, 2 and 3 in the bovine species
MW Pfaffl et al.
DOMESTIC ANIMAL ENDOCRINOLOGY (2002)