相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Sequencing platform and library preparation choices impact viral metagenomes
Sergei A. Solonenko et al.
BMC GENOMICS (2013)
Temporal Dynamics and Decay of Putatively Allochthonous and Autochthonous Viral Genotypes in Contrasting Freshwater Lakes
Ian Hewson et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Optimizing illumina next-generation sequencing library preparation for extremely at-biased genomes
Samuel O. Oyola et al.
BMC GENOMICS (2012)
Oxygen minimum zones harbour novel viral communities with low diversity
Noriko Cassman et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Towards quantitative metagenomics of wild viruses and other ultra-low concentration DNA samples: a rigorous assessment and optimization of the linker amplification method
Melissa B. Duhaime et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Artificial Polyploidy Improves Bacterial Single Cell Genome Recovery
Armand E. K. Dichosa et al.
PLOS ONE (2012)
Microarray-Based Evaluation of Whole-Community Genome DNA Amplification Methods
Jian Wang et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Evaluation of a Transposase Protocol for Rapid Generation of Shotgun High-Throughput Sequencing Libraries from Nanogram Quantities of DNA
Rachel Marine et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Diversity and Abundance of Single-Stranded DNA Viruses in Human Feces
Min-Soo Kim et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Amplification Methods Bias Metagenomic Libraries of Uncultured Single-Stranded and Double-Stranded DNA Viruses
Kyoung-Ho Kim et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Unraveling the viral tapestry (from inside the capsid out)
Shawn W. Polson et al.
ISME JOURNAL (2011)
Linear amplification for deep sequencing
Wieteke A. M. Hoeijmakers et al.
NATURE PROTOCOLS (2011)
Genomics of Bacterial and Archaeal Viruses: Dynamics within the Prokaryotic Virosphere
Mart Krupovic et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2011)
Multiple displacement amplification compromises quantitative analysis of metagenomes
Suzan Yilmaz et al.
NATURE METHODS (2010)
Biases in Illumina transcriptome sequencing caused by random hexamer priming
Kasper D. Hansen et al.
NUCLEIC ACIDS RESEARCH (2010)
Analysis of High-Throughput Sequencing and Annotation Strategies for Phage Genomes
Matthew R. Henn et al.
PLOS ONE (2010)
Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition
Andrew Adey et al.
GENOME BIOLOGY (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Metagenomic analysis of viruses in reclaimed water
Karyna Rosario et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G plus C)-biased genomes
Iwanka Kozarewa et al.
NATURE METHODS (2009)
Laboratory procedures to generate viral metagenomes
Rebecca V. Thurber et al.
NATURE PROTOCOLS (2009)
Metagenomic Analysis of Respiratory Tract DNA Viral Communities in Cystic Fibrosis and Non-Cystic Fibrosis Individuals
Dana Willner et al.
PLOS ONE (2009)
Amplification of uncultured single-stranded DNA viruses from rice paddy soil
Kyoung-Ho Kim et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Successful Amplification of Degraded DNA for Use With High-Throughput SNP Genotyping Platforms
Simon Mead et al.
HUMAN MUTATION (2008)
Something from (almost) nothing: the impact of multiple displacement amplification on microbial ecology
Erik K. Binga et al.
ISME JOURNAL (2008)
Functional metagenomic profiling of nine biomes
Elizabeth A. Dinsdale et al.
NATURE (2008)
Biodiversity and biogeography of phages in modern stromatolites and thrombolites
Christelle Desnues et al.
NATURE (2008)
A Bioinformatician's Guide to Metagenomics
Victor Kunin et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2008)
Microbial Ecology of Four Coral Atolls in the Northern Line Islands
Elizabeth A. Dinsdale et al.
PLOS ONE (2008)
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods
Konstantinos Mavromatis et al.
NATURE METHODS (2007)
Assessment of whole genome amplification-induced bias through high-throughput, massively parallel whole genome sequencing
Robert Pinard et al.
BMC GENOMICS (2006)
Environmental whole-genome amplification to access microbial populations in contaminated sediments
Carl B. Abulencia et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Ligation overcomes terminal underrepresentation in multiple displacement amplification of linear DNA
S Panelli et al.
BIOTECHNIQUES (2005)
Genomic DNA amplification from a single bacterium
A Raghunathan et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Genome-wide single-nucleotide polymorphism arrays demonstrate high fidelity of multiple displacement-based whole-genome amplification
MV Tzvetkov et al.
ELECTROPHORESIS (2005)
Whole genome analysis of genetic alterations in small DNA samples using hyperbranched strand displacement amplification and array-CGH
JM Lage et al.
GENOME RESEARCH (2003)
Comparative phage genomics and the evolution of Siphoviridae: insights from dairy phages
H Brussow et al.
MOLECULAR MICROBIOLOGY (2001)
分享论文
