相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。PEAR: a fast and accurate Illumina Paired-End reAd mergeR
Jiajie Zhang et al.
BIOINFORMATICS (2014)
Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
Susannah J. Salter et al.
BMC BIOLOGY (2014)
Assessment of quality control approaches for metagenomic data analysis
Qian Zhou et al.
SCIENTIFIC REPORTS (2014)
Challenges in the culture-independent analysis of oral and respiratory samples from intubated patients
Vladimir Lazarevic et al.
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2014)
Kraken: ultrafast metagenomic sequence classification using exact alignments
Derrick E. Wood et al.
GENOME BIOLOGY (2014)
Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences
Jai Ram Rideout et al.
PEERJ (2014)
The Effects of Airway Microbiome on Corticosteroid Responsiveness in Asthma
Elena Goleva et al.
AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE (2013)
New perspectives on viable microbial communities in low-biomass cleanroom environments
Parag Vaishampayan et al.
ISME JOURNAL (2013)
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Christian Quast et al.
NUCLEIC ACIDS RESEARCH (2013)
Microbial communities in the respiratory tract of patients with interstitial lung disease
Christian Garzoni et al.
THORAX (2013)
Enrichment of lung microbiome with supraglottic taxa is associated with increased pulmonary inflammation
Leopoldo N. Segal et al.
MICROBIOME (2013)
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
Daniel McDonald et al.
ISME JOURNAL (2012)
Deep Sequencing Analyses of Low Density Microbial Communities: Working at the Boundary of Accurate Microbiota Detection
Giske Biesbroek et al.
PLOS ONE (2012)
Comparison of DNA Extraction Methods for Microbial Community Profiling with an Application to Pediatric Bronchoalveolar Lavage Samples
Dana Willner et al.
PLOS ONE (2012)
Quantitative PCR of ear discharge from Indigenous Australian children with acute otitis media with perforation supports a role for Alloiococcus otitidis as a secondary pathogen
Robyn L. Marsh et al.
BMC EAR NOSE AND THROAT DISORDERS (2012)
UCHIME improves sensitivity and speed of chimera detection
Robert C. Edgar et al.
BIOINFORMATICS (2011)
Fast Identification and Removal of Sequence Contamination from Genomic and Metagenomic Datasets
Robert Schmieder et al.
PLOS ONE (2011)
Search and clustering orders of magnitude faster than BLAST
Robert C. Edgar
BIOINFORMATICS (2010)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Patrick D. Schloss et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)
分享论文
