相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Regulation of interferon-stimulated gene BST2 by a IncRNA transcribed from a shared bidirectional promoter
Hiroto Kambara et al.
FRONTIERS IN IMMUNOLOGY (2015)
Interferon-Stimulated Genes: A Complex Web of Host Defenses
William M. Schneider et al.
ANNUAL REVIEW OF IMMUNOLOGY, VOL 32 (2014)
BST-2 Expression in Human Hepatocytes is Inducible by All Three Types of Interferons and Restricts Production of Hepatitis C Virus
T. Amet et al.
CURRENT MOLECULAR MEDICINE (2014)
Identification of small ORFs in vertebrates using ribosome footprinting and evolutionary conservation
Ariel A. Bazzini et al.
EMBO JOURNAL (2014)
The human long noncoding RNA lnc-IL7R regulates the inflammatory response
Huachun Cui et al.
EUROPEAN JOURNAL OF IMMUNOLOGY (2014)
Dynamic Expression Profiling of Type I and Type III Interferon-Stimulated Hepatocytes Reveals a Stable Hierarchy of Gene Expression
Christopher R. Bolen et al.
HEPATOLOGY (2014)
Long Noncoding RNA NEAT1-Dependent SFPQ Relocation from Promoter Region to Paraspeckle Mediates IL8 Expression upon Immune Stimuli
Katsutoshi Imamura et al.
MOLECULAR CELL (2014)
The rise of regulatory RNA
Kevin V. Morris et al.
NATURE REVIEWS GENETICS (2014)
The UCSC Genome Browser database: 2014 update
Donna Karolchik et al.
NUCLEIC ACIDS RESEARCH (2014)
Negative regulation of the interferon response by an interferon-induced long non-coding RNA
Hiroto Kambara et al.
NUCLEIC ACIDS RESEARCH (2014)
The long noncoding RNA THRIL regulates TNFα expression through its interaction with hnRNPL
Zhonghan Li et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Evidence for a crucial role of a host non-coding RNA in influenza A virus replication
Carla Winterling et al.
RNA BIOLOGY (2014)
Annotation of long non-coding RNAs expressed in Collaborative Cross founder mice in response to respiratory virus infection reveals a new class of interferon-stimulated transcripts
Laurence Josset et al.
RNA BIOLOGY (2014)
The STAT3-Binding Long Noncoding RNA lnc-DC Controls Human Dendritic Cell Differentiation
Pin Wang et al.
SCIENCE (2014)
Comparison of Microarrays and RNA-Seq for Gene Expression Analyses of Dose-Response Experiments
Michael B. Black et al.
TOXICOLOGICAL SCIENCES (2014)
Long noncoding RNAs: fresh perspectives into the RNA world
Lin Yang et al.
TRENDS IN BIOCHEMICAL SCIENCES (2014)
Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes
Nicholas E. Iiott et al.
NATURE COMMUNICATIONS (2014)
Type I interferon regulates the expression of long non-coding RNAs
Elena Carnero et al.
FRONTIERS IN IMMUNOLOGY (2014)
Regulation of type I interferon responses
Lionel B. Ivashkiv et al.
NATURE REVIEWS IMMUNOLOGY (2014)
BST2/Tetherin inhibits hepatitis C virus production in human hepatoma cells
Xiao-Ben Pan et al.
ANTIVIRAL RESEARCH (2013)
lncRNA expression signatures in response to enterovirus 71 infection
Zhixin Yin et al.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2013)
Divergent transcription is associated with promoters of transcriptional regulators
Cyrille Lepoivre et al.
BMC GENOMICS (2013)
Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
Helga Thorvaldsdottir et al.
BRIEFINGS IN BIOINFORMATICS (2013)
The NeST Long ncRNA Controls Microbial Susceptibility and Epigenetic Activation of the Interferon-γ Locus
J. Antonio Gomez et al.
CELL (2013)
Fine tuning type I interferon responses
Paul J. Hertzog et al.
CYTOKINE & GROWTH FACTOR REVIEWS (2013)
Hepatitis B Virus X Protein (HBx)-Related Long Noncoding RNA (lncRNA) Down-Regulated Expression by HBx (Dreh) Inhibits Hepatocellular Carcinoma Metastasis by Targeting the Intermediate Filament Protein Vimentin
Jin-feng Huang et al.
HEPATOLOGY (2013)
Synergistic Activation of Inflammatory Cytokine Genes by Interferon-γ-Induced Chromatin Remodeling and Toll-like Receptor Signaling
Yu Qiao et al.
IMMUNITY (2013)
Role of microRNAs and long-non-coding RNAs in CD4+T-cell differentiation
Massimiliano Pagani et al.
IMMUNOLOGICAL REVIEWS (2013)
The Antiviral Activities of ISG15
David J. Morales et al.
JOURNAL OF MOLECULAR BIOLOGY (2013)
BST-2/tetherin: Structural biology, viral antagonism, and immunobiology of a potent host antiviral factor
Melissa Swiecki et al.
MOLECULAR IMMUNOLOGY (2013)
Regulation of hepatic innate immunity by hepatitis C virus
Stacy M. Horner et al.
NATURE MEDICINE (2013)
LNCipedia: a database for annotated human lncRNA transcript sequences and structures
Pieter-Jan Volders et al.
NUCLEIC ACIDS RESEARCH (2013)
The Proteomics Identifications (PRIDE) database and associated tools: status in 2013
Juan Antonio Vizcaino et al.
NUCLEIC ACIDS RESEARCH (2013)
CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model
Liguo Wang et al.
NUCLEIC ACIDS RESEARCH (2013)
Large Scale Comparison of Gene Expression Levels by Microarrays and RNAseq Using TCGA Data
Yan Guo et al.
PLOS ONE (2013)
A Long Noncoding RNA Mediates Both Activation and Repression of Immune Response Genes
Susan Carpenter et al.
SCIENCE (2013)
Interferon-induced ISG15 pathway: an ongoing virus-host battle
Chen Zhao et al.
TRENDS IN MICROBIOLOGY (2013)
NEAT1 Long Noncoding RNA and Paraspeckle Bodies Modulate HIV-1 Posttranscriptional Expression
Quan Zhang et al.
MBIO (2013)
Mechanism of HIV-1 Virion Entrapment by Tetherin
Siddarth Venkatesh et al.
PLOS PATHOGENS (2013)
Vpu Binds Directly to Tetherin and Displaces It from Nascent Virions
Matthew W. McNatt et al.
PLOS PATHOGENS (2013)
A mammalian pseudogene lncRNA at the interface of inflammation and anti-inflammatory therapeutics
Nicole A. Rapicavoli et al.
ELIFE (2013)
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
Daehwan Kim et al.
GENOME BIOLOGY (2013)
AAV vectors transduce hepatocytes in vivo as efficiently in cirrhotic as in healthy rat livers
L. Sobrevals et al.
GENE THERAPY (2012)
GENCODE: The reference human genome annotation for The ENCODE Project
Jennifer Harrow et al.
GENOME RESEARCH (2012)
Intrinsic Cellular Defenses against Human Immunodeficiency Viruses
Daniel Blanco-Melo et al.
IMMUNITY (2012)
Elevation of Highly Up-regulated in Liver Cancer (HULC) by Hepatitis B Virus X Protein Promotes Hepatoma Cell Proliferation via Down-regulating p18
Yumei Du et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2012)
Influenza Virus Partially Counteracts Restriction Imposed by Tetherin/BST-2
Bastien Mangeat et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2012)
Cutting Edge: Influence of Tmevpg1, a Long Intergenic Noncoding RNA, on the Expression of Ifng by Th1 Cells
Sarah P. Collier et al.
JOURNAL OF IMMUNOLOGY (2012)
Landscape of transcription in human cells
Sarah Djebali et al.
NATURE (2012)
An integrated encyclopedia of DNA elements in the human genome
Ian Dunham et al.
NATURE (2012)
Increased in vivo inhibition of gene expression by combining RNA interference and U1 inhibition
Lorea Blazquez et al.
NUCLEIC ACIDS RESEARCH (2012)
Global mapping of translation initiation sites in mammalian cells at single-nucleotide resolution
Sooncheol Lee et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
The Two Faces of Interferon-γ in Cancer
M. Raza Zaidi et al.
CLINICAL CANCER RESEARCH (2011)
The Antiviral Protein Viperin Inhibits Hepatitis C Virus Replication via Interaction With Nonstructural Protein 5A
Karla J. Helbig et al.
HEPATOLOGY (2011)
Long Noncoding RNA High Expression in Hepatocellular Carcinoma Facilitates Tumor Growth Through Enhancer of Zeste Homolog 2 in Humans
Fu Yang et al.
HEPATOLOGY (2011)
Antisense expression increases gene expression variability and locus interdependency
Zhenyu Xu et al.
MOLECULAR SYSTEMS BIOLOGY (2011)
Integrative genomics viewer
James T. Robinson et al.
NATURE BIOTECHNOLOGY (2011)
Human Cancer Long Non-Coding RNA Transcriptomes
Ewan A. Gibb et al.
PLOS ONE (2011)
Functional consequences of bidirectional promoters
Wu Wei et al.
TRENDS IN GENETICS (2011)
Induction and evasion of type I interferon responses by influenza viruses
Adolfo Garcia-Sastre
VIRUS RESEARCH (2011)
The interferon stimulated gene 15 functions as a proviral factor for the hepatitis C virus and as a regulator of the IFN response
Ruth Broering et al.
GUT (2010)
ISG15, a ubiquitin-like interferon-stimulated gene, promotes hepatitis C virus production in vitro: implications for chronic infection and response to treatment
Limin Chen et al.
JOURNAL OF GENERAL VIROLOGY (2010)
Interferons and MicroRNAs
Michael David
JOURNAL OF INTERFERON AND CYTOKINE RESEARCH (2010)
Interferon-Induced Cell Membrane Proteins, IFITM3 and Tetherin, Inhibit Vesicular Stomatitis Virus Infection via Distinct Mechanisms
Jessica M. Weidner et al.
JOURNAL OF VIROLOGY (2010)
Positive Regulation of Interferon Regulatory Factor 3 Activation by Herc5 via ISG15 Modification
He-Xin Shi et al.
MOLECULAR AND CELLULAR BIOLOGY (2010)
Molecular Interplay of the Noncoding RNA ANRIL and Methylated Histone H3 Lysine 27 by Polycomb CBX7 in Transcriptional Silencing of INK4a
Kyoko L. Yap et al.
MOLECULAR CELL (2010)
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
Cole Trapnell et al.
NATURE BIOTECHNOLOGY (2010)
Adenovirus VA RNA-derived miRNAs target cellular genes involved in cell growth, gene expression and DNA repair
Oscar Aparicio et al.
NUCLEIC ACIDS RESEARCH (2010)
Combination of RNA interference and U1 inhibition leads to increased inhibition of gene expression
X. Abad et al.
NUCLEIC ACIDS RESEARCH (2010)
Hepatitis C Virus Controls Interferon Production through PKR Activation
Noella Arnaud et al.
PLOS ONE (2010)
Unique Signatures of Long Noncoding RNA Expression in Response to Virus Infection and Altered Innate Immune Signaling
Xinxia Peng et al.
MBIO (2010)
Tetherin Inhibits HIV-1 Release by Directly Tethering Virions to Cells
David Perez-Caballero et al.
CELL (2009)
Hepatitis C Virus Blocks Interferon Effector Function by Inducing Protein Kinase R Phosphorylation
Urtzi Garaigorta et al.
CELL HOST & MICROBE (2009)
Interferon gamma: A master regulator of atherosclerosis
James E. McLaren et al.
CYTOKINE & GROWTH FACTOR REVIEWS (2009)
Genome-Wide Identification of Long Noncoding RNAs in CD8+ T Cells
Ken C. Pang et al.
JOURNAL OF IMMUNOLOGY (2009)
Alpha Interferon Induces Long-Lasting Refractoriness of JAK-STAT Signaling in the Mouse Liver through Induction of USP18/UBP43
Magdalena Sarasin-Filipowicz et al.
MOLECULAR AND CELLULAR BIOLOGY (2009)
Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
Mitchell Guttman et al.
NATURE (2009)
Control of alternative splicing through siRNA-mediated transcriptional gene silencing
Mariano Allo et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2009)
Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA
Wenqiang Yu et al.
NATURE (2008)
Induced ncRNAs allosterically modify RNA-binding proteins in cis to inhibit transcription
Xiangting Wang et al.
NATURE (2008)
The ties that bind a virus to the cell
Robert P. Kruger
CELL (2008)
Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of β-secretase
Mohammad Ali Faghihi et al.
NATURE MEDICINE (2008)
Specific expression of long noncoding RNAs in the mouse brain
Tim R. Mercer et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Interferon signaling and treatment outcome in chronic hepatitis C
Magdalena Sarasin-Filipowicz et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Negative feedback regulation of RIG-1-mediated antiviral signaling by interferon-induced ISG15 conjugation
Min-Jung Kim et al.
JOURNAL OF VIROLOGY (2008)
Tetherin inhibits retrovirus release and is antagonized by HIV-1 Vpu
Stuart J. D. Neil et al.
NATURE (2008)
Revisiting the protein-coding gene catalog of Drosophila melanogaster using 12 fly genomes
Michael F. Lin et al.
GENOME RESEARCH (2007)
Thermodynamic instability of siRNA duplex is a prerequisite for dependable prediction of siRNA activities
Masatoshi Ichihara et al.
NUCLEIC ACIDS RESEARCH (2007)
CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine
Lei Kong et al.
NUCLEIC ACIDS RESEARCH (2007)
Transcription factor binding and modified histones in human bidirectional promoters
Jane M. Lin et al.
GENOME RESEARCH (2007)
Comparison of approaches for rational siRNA design leading to a new efficient and transparent method
Olga Matveeva et al.
NUCLEIC ACIDS RESEARCH (2007)
IFN-stimulated gene 15 functions as a critical antiviral molecule against influenza, herpes, and Sindbis viruses
Deborah J. Lenschow et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
SOCS proteins, cytokine signalling and immune regulation
Akihiko Yoshimura et al.
NATURE REVIEWS IMMUNOLOGY (2007)
Effect of adenovirus-mediated RNA interference on endogenous microRNAs in a mouse model of multidrug resistance protein 2 gene silencing
Inigo Narvaiza et al.
JOURNAL OF VIROLOGY (2006)
Interferons α and λ inhibit hepatitis C virus replication with distinct signal transduction and gene regulation kinetics
Tobias Marcello et al.
GASTROENTEROLOGY (2006)
Inhibition of vesicular stomatitis virus infection in epithelial cells by alpha interferon-induced soluble secreted proteins
Mausumi Basu et al.
JOURNAL OF GENERAL VIROLOGY (2006)
Systematic analysis of head-to-head gene organization: Evolutionary conservation and potential biological relevance
Yuan-Yuan Li et al.
PLOS COMPUTATIONAL BIOLOGY (2006)
Complex loci in human and mouse genomes
Par G. Engstrom et al.
PLOS GENETICS (2006)
Complex modulation of cell type-specific signaling in response to type I Interferons
Anette H. H. van Boxel-Dezaire et al.
IMMUNITY (2006)
Quantification of different human alpha interferon subtypes and pegylated interferon activities by measuring MxA promoter activation
C François et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2005)
Production of infectious hepatitis C virus in tissue culture from a cloned viral genome (vol 11, pg 791, 2005)
T Wakita et al.
NATURE MEDICINE (2005)
Interferon type I gene expression in chronic hepatitis C
S Mihm et al.
LABORATORY INVESTIGATION (2004)
Intrahepatic gene expression during chronic hepatitis C virus infection in chimpanzees
CB Bigger et al.
JOURNAL OF VIROLOGY (2004)
An abundance of bidirectional promoters in the human genome
ND Trinklein et al.
GENOME RESEARCH (2004)
Bidirectional gene organization: A common architectural feature of the human genome
N Adachi et al.
CELL (2002)