4.4 Article

Uberon, an integrative multi-species anatomy ontology

期刊

GENOME BIOLOGY
卷 13, 期 1, 页码 -

出版社

BMC
DOI: 10.1186/gb-2012-13-1-r5

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资金

  1. National Institutes of Health [5R01HG004838, P41HG002273]
  2. Office of Science, Office of Basic Energy Sciences, of the US Department of Energy [DE-AC02-05CH11231]
  3. American Recovery and Reinvestment Act [1U24RR029825-01, P41HG002273-09S1]
  4. NATIONAL CENTER FOR RESEARCH RESOURCES [U24RR029825] Funding Source: NIH RePORTER
  5. NATIONAL HUMAN GENOME RESEARCH INSTITUTE [R01HG004838, U41HG002273, P41HG002273] Funding Source: NIH RePORTER

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We present Uberon, an integrated cross-species ontology consisting of over 6,500 classes representing a variety of anatomical entities, organized according to traditional anatomical classification criteria. The ontology represents structures in a species-neutral way and includes extensive associations to existing species-centric anatomical ontologies, allowing integration of model organism and human data. Uberon provides a necessary bridge between anatomical structures in different taxa for cross-species inference. It uses novel methods for representing taxonomic variation, and has proved to be essential for translational phenotype analyses. Uberon is available at http://uberon.org

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