相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Interspersed DNA Repeats bcr1-bcr18 of Bacillus cereus Group Bacteria Form Three Distinct Groups with Different Evolutionary and Functional Patterns
Simen M. Kristoffersen et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
Dynamic profiling of mRNA turnover reveals gene-specific and system-wide regulation of mRNA decay
Sarah E. Munchel et al.
MOLECULAR BIOLOGY OF THE CELL (2011)
Global quantification of mammalian gene expression control
Bjoern Schwanhaeusser et al.
NATURE (2011)
Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells
Michal Rabani et al.
NATURE BIOTECHNOLOGY (2011)
Bacillus anthracis genome organization in light of whole transcriptome sequencing
Jeffrey Martin et al.
BMC BIOINFORMATICS (2010)
The global dynamics of RNA stability orchestrates responses to cellular activation
Jack D. Keene
BMC BIOLOGY (2010)
RNA-seq: from technology to biology
Samuel Marguerat et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2010)
Bacillus cereus, a Volatile Human Pathogen
Edward J. Bottone
CLINICAL MICROBIOLOGY REVIEWS (2010)
FRT-seq: amplification-free, strand-specific transcriptome sequencing
Lira Mamanova et al.
NATURE METHODS (2010)
Comprehensive comparative analysis of strand-specific RNA sequencing methods
Joshua Z. Levin et al.
NATURE METHODS (2010)
The Genome of a Bacillus Isolate Causing Anthrax in Chimpanzees Combines Chromosomal Properties of B. cereus with B. anthracis Virulence Plasmids
Silke R. Klee et al.
PLOS ONE (2010)
Short RNA half-lives in the slow-growing marine cyanobacterium Prochlorococcus
Claudia Steglich et al.
GENOME BIOLOGY (2010)
What Sets Bacillus anthracis Apart from Other Bacillus Species?
Anne-Brit Kolsto et al.
ANNUAL REVIEW OF MICROBIOLOGY (2009)
RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis
Karen Shahbabian et al.
EMBO JOURNAL (2009)
Structure and Complexity of a Bacterial Transcriptome
Karla D. Passalacqua et al.
JOURNAL OF BACTERIOLOGY (2009)
Novel Activities of Glycolytic Enzymes in Bacillus subtilis
Fabian M. Commichau et al.
MOLECULAR & CELLULAR PROTEOMICS (2009)
Transcript stability in the protein interaction network of Escherichia coli
Sarath Chandra Janga et al.
MOLECULAR BIOSYSTEMS (2009)
The transcriptionally active regions in the genome of Bacillus subtilis
Simon Rasmussen et al.
MOLECULAR MICROBIOLOGY (2009)
Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G plus C)-biased genomes
Iwanka Kozarewa et al.
NATURE METHODS (2009)
Rfam: updates to the RNA families database
Paul P. Gardner et al.
NUCLEIC ACIDS RESEARCH (2009)
Multiple target regulation by small noncoding RNAs rewires gene expression at the post-transcriptional level
Kai Papenfort et al.
RESEARCH IN MICROBIOLOGY (2009)
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Ben Langmead et al.
GENOME BIOLOGY (2009)
Extending the Bacillus cereus group genomics to putative food-borne pathogens of different toxicity
Alla Lapidus et al.
CHEMICO-BIOLOGICAL INTERACTIONS (2008)
Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
Brian T. Wilhelm et al.
NATURE (2008)
Structural insights into the dual activity of RNase J
Ines Li de la Sierra-Gallay et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2008)
Substantial biases in ultra-short read data sets from high-throughput DNA sequencing
Juliane C. Dohm et al.
NUCLEIC ACIDS RESEARCH (2008)
Translation initiation factor a/eIF2(-γ) counteracts 5′ to 3′ mRNA decay in the archaeon Sulfolobus solfataricus
David Hasenoehrl et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
The transcriptional landscape of the yeast genome defined by RNA sequencing
Ugrappa Nagalakshmi et al.
SCIENCE (2008)
Choosing BLAST options for better detection of orthologs as reciprocal best hits
Gabriel Moreno-Hagelsieb et al.
BIOINFORMATICS (2008)
Exploring the evolution of the Bacillus cereus group repeat element bcr1 by comparative genome analysis of closely related strains
Are Klevan et al.
MICROBIOLOGY-SGM (2007)
Global analysis of mRNA decay in Halobacterium salinarum NRC-1 at single-gene resolution using DNA Microarrays
Sonja Hundt et al.
JOURNAL OF BACTERIOLOGY (2007)
Low concentrations of bile salts induce stress responses and reduce motility in Bacillus cereus ATCC 14570
Simen M. Kristoffersen et al.
JOURNAL OF BACTERIOLOGY (2007)
5′-to-3′ exoribonuclease activity in Bacteria:: Role of RNase J1 in rRNA maturation and 5′ stability of mRNA
Nathalie Mathy et al.
CELL (2007)
Genomics and gene transcription kinetics in yeast
Jose E. Perez-Ortin et al.
TRENDS IN GENETICS (2007)
Role of mRNA stability in growth phase regulation of gene expression in the group A streptococcus
Timothy C. Barnett et al.
JOURNAL OF BACTERIOLOGY (2007)
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake
Carleton L. Kingsford et al.
GENOME BIOLOGY (2007)
Complete sequence analysis of novel plasmids from emetic and periodontal Bacillus cereus isolates reveals a common evolutionary history among the B-cereus-group plasmids, including Bacillus anthracis pXO1
David A. Rasko et al.
JOURNAL OF BACTERIOLOGY (2007)
Comparative analysis of two-component signal transduction systems of Bacillus cereus, Bacillus thuringiensis and Bacillus anthracis
Mark de Been et al.
MICROBIOLOGY-SGM (2006)
The Bacillus cereus group:: novel aspects of population structure and genome dynamics
N. J. Tourasse et al.
JOURNAL OF APPLIED MICROBIOLOGY (2006)
Pathogenomic sequence analysis of Bacillus cereus and Bacillus thuringiensis isolates closely related to Bacillus anthracis
CS Han et al.
JOURNAL OF BACTERIOLOGY (2006)
Global analysis of mRNA stability in the archaeon Sulfolobus
Anders F. Andersson et al.
GENOME BIOLOGY (2006)
Role of mRNA stability during genome-wide adaptation of Lactococcus lactis to carbon starvation
E Redon et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
Effect of 5′-proximal elements on decay of a model mRNA in Bacillus subtilis
JS Sharp et al.
MOLECULAR MICROBIOLOGY (2005)
Co-evolution of tRNA 3′ trailer sequences with 3′ processing enzymes in bacteria
ZW Li et al.
RNA (2005)
GIL16, a new gram-positive tectiviral phage related to the Bacillus thuringiensis GIL01 and the Bacillus cereus pBClin15 elements
C Verheust et al.
JOURNAL OF BACTERIOLOGY (2005)
Biosynthetic labeling of RNA with uracil phosphoribosyltransferase allows cell-specific microarray analysis of mRNA synthesis and decay
MD Cleary et al.
NATURE BIOTECHNOLOGY (2005)
Ribonucleases J1 and J2: two novel endoribonucleases in B.subtilis with functional homology to E.coli RNase E
S Even et al.
NUCLEIC ACIDS RESEARCH (2005)
The genome sequence of Bacillus cereus ATCC 10987 reveals metabolic adaptations and a large plasmid related to Bacillus anthracis pXO1
DA Rasko et al.
NUCLEIC ACIDS RESEARCH (2004)
The bcr1 DNA repeat element is specific to the Bacillus cereus group and exhibits mobile element characteristics
OA Okstad et al.
JOURNAL OF BACTERIOLOGY (2004)
Identification of anthrax toxin genes in a Bacillus cereus associated with an illness resembling inhalation anthrax
AR Hoffmaster et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Effect of translational signals on mRNA decay in Bacillus subtilis
JS Sharp et al.
JOURNAL OF BACTERIOLOGY (2003)
Genome-wide survey of mRNA half-lives in Bacillus subtilis identifies extremely stable mRNAs
G Hambraeus et al.
MOLECULAR GENETICS AND GENOMICS (2003)
Mfold web server for nucleic acid folding and hybridization prediction
M Zuker
NUCLEIC ACIDS RESEARCH (2003)
Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis
N Ivanova et al.
NATURE (2003)
Expression of the glycolytic gapA operon in Bacillus subtilis:: differential syntheses of proteins encoded by the operon
C Meinken et al.
MICROBIOLOGY-SGM (2003)
Global RNA half-life analysis in Escherichia coli reveals positional patterns of transcript degradation
DW Selinger et al.
GENOME RESEARCH (2003)
Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays
JA Bernstein et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
Precision and functional specificity in mRNA decay
YL Wang et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
A probabilistic, method for identifying start codons in bacterial genomes
BE Suzek et al.
BIOINFORMATICS (2001)
Transcription of glycolytic genes and operons in Bacillus subtilis:: evidence for the presence of multiple levels of control of the gapA operon
H Ludwig et al.
MOLECULAR MICROBIOLOGY (2001)
Bacillus anthracis, Bacillus cereus, and Bacillus thuringiensis -: One species on the basis of genetic evidence
E Helgason et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2000)