相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Genetic Dissection of Sesquiterpene Biosynthesis by Fusarium fujikuroi
Nelson L. Brock et al.
CHEMBIOCHEM (2013)
The velvet complex governs mycotoxin production and virulence of Fusarium oxysporum on plant and mammalian hosts
Manuel S. Lopez-Berges et al.
MOLECULAR MICROBIOLOGY (2013)
A Functional Bikaverin Biosynthesis Gene Cluster in Rare Strains of Botrytis cinerea Is Positively Controlled by VELVET
Julia Schumacher et al.
PLOS ONE (2013)
Functional Analyses of Trichoderma reesei LAE1 Reveal Conserved and Contrasting Roles of This Regulator
Razieh Karimi-Aghcheh et al.
G3-GENES GENOMES GENETICS (2013)
Plant-Symbiotic Fungi as Chemical Engineers: Multi-Genome Analysis of the Clavicipitaceae Reveals Dynamics of Alkaloid Loci
Christopher L. Schardl et al.
PLOS GENETICS (2013)
Comparative Genome Structure, Secondary Metabolite, and Effector Coding Capacity across Cochliobolus Pathogens
Bradford J. Condon et al.
PLOS GENETICS (2013)
Identification and Regulation of fusA, the Polyketide Synthase Gene Responsible for Fusarin Production in Fusarium fujikuroi
Violeta Diaz-Sanchez et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Biosynthesis of Fusarubins Accounts for Pigmentation of Fusarium fujikuroi Perithecia
Lena Studt et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
pymzML-Python module for high-throughput bioinformatics on mass spectrometry data
Till Bald et al.
BIOINFORMATICS (2012)
A heptaketide naphthaldehyde produced by a polyketide synthase from Nectria haematococca
Takayoshi Awakawa et al.
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS (2012)
Comparison of transcriptome technologies in the pathogenic fungus Aspergillus fumigatus reveals novel insights into the genome and MpkA dependent gene expression
Sebastian Müller et al.
BMC GENOMICS (2012)
Centromeres of filamentous fungi
Kristina M. Smith et al.
CHROMOSOME RESEARCH (2012)
Phylogenomic and functional domain analysis of polyketide synthases in Fusarium
Daren W. Brown et al.
FUNGAL BIOLOGY (2012)
Segregation of secondary metabolite biosynthesis in hybrids of Fusarium fujikuroi and Fusarium proliferatum
L. Studt et al.
FUNGAL GENETICS AND BIOLOGY (2012)
Tools for Botrytis cinerea: New expression vectors make the gray mold fungus more accessible to cell biology approaches
Julia Schumacher
FUNGAL GENETICS AND BIOLOGY (2012)
Identification of gene clusters associated with fusaric acid, fusarin, and perithecial pigment production in Fusarium verticillioides
Daren W. Brown et al.
FUNGAL GENETICS AND BIOLOGY (2012)
Horizontal Transfer and Death of a Fungal Secondary Metabolic Gene Cluster
Matthew A. Campbell et al.
GENOME BIOLOGY AND EVOLUTION (2012)
Quick guide to polyketide synthase and nonribosomal synthetase genes in Fusarium
Frederik T. Hansen et al.
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2012)
Structure Elucidation of New Fusarins Revealing Insights in the Rearrangement Mechanisms of the Fusarium Mycotoxin Fusarin C
Karin Kleigrewe et al.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2012)
New Approach via Gene Knockout and Single-Step Chemical Reaction for the Synthesis of Isotopically Labeled Fusarin C as an Internal Standard for the Analysis of this Fusarium Mycotoxin in Food and Feed Samples
Karin Kleigrewe et al.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2012)
Overexpression of the Aspergillus nidulans histone 4 acetyltransferase EsaA increases activation of secondary metabolite production
Alexandra A. Soukup et al.
MOLECULAR MICROBIOLOGY (2012)
A cross-platform toolkit for mass spectrometry and proteomics
Matthew C. Chambers et al.
NATURE BIOTECHNOLOGY (2012)
Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses
Richard J. O'Connell et al.
NATURE GENETICS (2012)
The Sfp-Type 4′-Phosphopantetheinyl Transferase Ppt1 of Fusarium fujikuroi Controls Development, Secondary Metabolism and Pathogenicity
Philipp Wiemann et al.
PLOS ONE (2012)
Effect of mass spectrometric parameters on peptide and protein identification rates for shotgun proteomic experiments on an LTQ-orbitrap mass analyzer
Anastasia Kalli et al.
PROTEOMICS (2012)
First fungal genome sequence from Africa: A preliminary analysis
Brenda D. Wingfield et al.
SOUTH AFRICAN JOURNAL OF SCIENCE (2012)
Comparative Genome Analysis of Trichophyton rubrum and Related Dermatophytes Reveals Candidate Genes Involved in Infection
Diego A. Martinez et al.
MBIO (2012)
Proteomics to go: Proteomatic enables the user-friendly creation of versatile MS/MS data evaluation workflows
Michael Specht et al.
BIOINFORMATICS (2011)
Regulation of chromatin by histone modifications
Andrew J. Bannister et al.
CELL RESEARCH (2011)
Horizontal Transfer of a Large and Highly Toxic Secondary Metabolic Gene Cluster between Fungi
Jason C. Slot et al.
CURRENT BIOLOGY (2011)
Fusarium verticillioides chitin synthases CHS5 and CHS7 are required for normal growth and pathogenicity
Troy M. Larson et al.
CURRENT GENETICS (2011)
Regulation of secondary metabolism by chromatin structure and epigenetic codes
Joseph Strauss et al.
FUNGAL GENETICS AND BIOLOGY (2011)
A New High-Performance Liquid Chromatography-Tandem Mass Spectrometry Method Based on Dispersive Solid Phase Extraction for the Determination of the Mycotoxin Fusarin C in Corn Ears and Processed Corn Samples
Karin Kleigrewe et al.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2011)
mzML-a Community Standard for Mass Spectrometry Data
Lennart Martens et al.
MOLECULAR & CELLULAR PROTEOMICS (2011)
Heterochromatin Is Required for Normal Distribution of Neurospora crassa CenH3
Kristina M. Smith et al.
MOLECULAR AND CELLULAR BIOLOGY (2011)
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
Koichiro Tamura et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
SignalP 4.0: discriminating signal peptides from transmembrane regions
Thomas Nordahl Petersen et al.
NATURE METHODS (2011)
FGDB: revisiting the genome annotation of the plant pathogen Fusarium graminearum
Philip Wong et al.
NUCLEIC ACIDS RESEARCH (2011)
EpiChIP: gene-by-gene quantification of epigenetic modification levels
Daniel Hebenstreit et al.
NUCLEIC ACIDS RESEARCH (2011)
Bacteria-induced natural product formation in the fungus Aspergillus nidulans requires Saga/Ada-mediated histone acetylation
Hans-Wilhelm Nuetzmann et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Concerted action of the new Genomic Peptide Finder and AUGUSTUS allows for automated proteogenomic annotation of the Chlamydomonas reinhardtii genome
Michael Specht et al.
PROTEOMICS (2011)
Genomic Analysis of the Necrotrophic Fungal Pathogens Sclerotinia sclerotiorum and Botrytis cinerea
Joelle Amselem et al.
PLOS GENETICS (2011)
Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma
Christian P. Kubicek et al.
GENOME BIOLOGY (2011)
Large scale purification of B-type fumonisins using centrifugal partition chromatography (CPC)
Florian Hübner et al.
Mycotoxin Research (2011)
A framework for oligonucleotide microarray preprocessing
Benilton S. Carvalho et al.
BIOINFORMATICS (2010)
H2B- and H3-Specific Histone Deacetylases Are Required for DNA Methylation in Neurospora crassa
Kristina M. Smith et al.
GENETICS (2010)
Characterizing the Anaerobic Response of Chlamydomonas reinhardtii by Quantitative Proteomics
Mia Terashima et al.
MOLECULAR & CELLULAR PROTEOMICS (2010)
Heterochromatic marks are associated with the repression of secondary metabolism clusters in Aspergillus nidulans
Yazmid Reyes-Dominguez et al.
MOLECULAR MICROBIOLOGY (2010)
Functional characterization and manipulation of the apicidin biosynthetic pathway in Fusarium semitectum
Jian-Ming Jin et al.
MOLECULAR MICROBIOLOGY (2010)
Transcriptome analysis of nitrate assimilation in Aspergillus nidulans reveals connections to nitric oxide metabolism
Thorsten Schinko et al.
MOLECULAR MICROBIOLOGY (2010)
Epigenome manipulation as a pathway to new natural product scaffolds and their congeners
Robert H. Cichewicz
NATURAL PRODUCT REPORTS (2010)
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
Li-Jun Ma et al.
NATURE (2010)
SIMAP-a comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters
Thomas Rattei et al.
NUCLEIC ACIDS RESEARCH (2010)
Gibberellin biosynthesis and gibberellin oxidase activities in Fusarium sacchari, Fusarium konzum and Fusarium subglutinans strains
Claudia Troncoso et al.
PHYTOCHEMISTRY (2010)
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
Stephane Guindon et al.
SYSTEMATIC BIOLOGY (2010)
De novo Assembly of a 40 Mb Eukaryotic Genome from Short Sequence Reads: Sordaria macrospora, a Model Organism for Fungal Morphogenesis
Minou Nowrousian et al.
PLOS GENETICS (2010)
Regulation of Carotenogenesis and Secondary Metabolism by Nitrogen in Wild-Type Fusarium fujikuroi and Carotenoid-Overproducing Mutants
Roberto Rodriguez-Ortiz et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
qvality: non-parametric estimation of q-values and posterior error probabilities
Lukas Kall et al.
BIOINFORMATICS (2009)
Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2009)
Full Dynamic Range Proteome Analysis of S. cerevisiae by Targeted Proteomics
Paola Picotti et al.
CELL (2009)
Biosynthesis of the cyclooligomer depsipeptide bassianolide, an insecticidal virulence factor of Beauveria bassiana
Yuquan Xu et al.
FUNGAL GENETICS AND BIOLOGY (2009)
A Gene Cluster Containing Two Fungal Polyketide Synthases Encodes the Biosynthetic Pathway for a Polyketide, Asperfuranone, in Aspergillus nidulans
Yi-Ming Chiang et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2009)
Biosynthesis of the red pigment bikaverin in Fusarium fujikuroi: genes, their function and regulation
Philipp Wiemann et al.
MOLECULAR MICROBIOLOGY (2009)
Chromatin-level regulation of biosynthetic gene clusters
Jin Woo Bok et al.
NATURE CHEMICAL BIOLOGY (2009)
Assessing the gene space in draft genomes
Genis Parra et al.
NUCLEIC ACIDS RESEARCH (2009)
PEDANT covers all complete RefSeq genomes
Mathias C. Walter et al.
NUCLEIC ACIDS RESEARCH (2009)
Diversity, regulation, and evolution of the gibberellin biosynthetic pathway in fungi compared to plants and bacteria
Christiane Boemke et al.
PHYTOCHEMISTRY (2009)
Infection Dynamics of Fusarium mangiferae, Causal Agent of Mango Malformation Disease
E. Gamliel-Atinsky et al.
PHYTOPATHOLOGY (2009)
The Genome of Nectria haematococca: Contribution of Supernumerary Chromosomes to Gene Expansion
Jeffrey J. Coleman et al.
PLOS GENETICS (2009)
Isolation and characterization of the gibberellin biosynthetic gene cluster in Sphaceloma manihoticola
Christiane Boemke et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Loss of Gibberellin Production in Fusarium verticillioides (Gibberella fujikuroi MP-A) Is Due to a Deletion in the Gibberellic Acid Gene Cluster
Christiane Boemke et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
FUNYBASE: a FUNgal phYlogenomic dataBASE
Sylvain Marthey et al.
BMC BIOINFORMATICS (2008)
Module evolution and substrate specificity of fungal nonribosomal peptide synthetases involved in siderophore biosynthesis
Kathryn E. Bushley et al.
BMC EVOLUTIONARY BIOLOGY (2008)
A fumonisin blosynthetic gene cluster in Fusarium oxysporum strain O-1890 and the genetic basis for B versus C fumonisin production
Robert H. Proctor et al.
FUNGAL GENETICS AND BIOLOGY (2008)
Production of gibberellic acids by an orchid-associated Fusarium proliferatum strain
Elena A. Tsavkelova et al.
FUNGAL GENETICS AND BIOLOGY (2008)
Role of AREA, a regulator of nitrogen metabolism, during colonization of maize kernels and fumonisin biosynthesis in Fusarium verticillioides
Hun Kim et al.
FUNGAL GENETICS AND BIOLOGY (2008)
DupMasker:: A tool for annotating primate segmental duplications
Zhaoshi Jiang et al.
GENOME RESEARCH (2008)
Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training
Vardges Ter-Hovhannisyan et al.
GENOME RESEARCH (2008)
Transformation-mediated complementation of a FUM gene cluster deletion in Fusarium verticillioides restores both fumonisin production and pathogenicity on maize seedlings
Anthony E. Glenn et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2008)
Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum
Marco A. van den Berg et al.
NATURE BIOTECHNOLOGY (2008)
Epigenetic remodeling of the fungal secondary metabolome
Russell B. Williams et al.
ORGANIC & BIOMOLECULAR CHEMISTRY (2008)
Assessing the Performance of Single-Copy Genes for Recovering Robust Phylogenies
G. Aguileta et al.
SYSTEMATIC BIOLOGY (2008)
Subcellular location prediction of proteins using support vector machines with alignment of block sequences utilizing amino acid composition
Takeyuki Tamura et al.
BMC BIOINFORMATICS (2007)
The initiation and pattern of spread of histone H4 acetylation parallel the order of transcriptional activation of genes in the aflatoxin cluster
Ludmila V. Roze et al.
MOLECULAR MICROBIOLOGY (2007)
Evolutionary history and positional shift of a rice centromere
Jianxin Ma et al.
GENETICS (2007)
Disruption of a maize 9-lipoxygenase results in increased resistance to fungal pathogens and reduced levels of contamination with mycotoxin fumonisin
Xiquan Gao et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2007)
LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons
Zhao Xu et al.
NUCLEIC ACIDS RESEARCH (2007)
The Fusarium verticillioides FUM gene cluster encodes a Zn(II)2Cys6 protein that affects FUM gene expression and fumonisin production
Daren W. Brown et al.
EUKARYOTIC CELL (2007)
Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88
Herman J. Pel et al.
NATURE BIOTECHNOLOGY (2007)
Nonribosomal peptide synthetase (NPS) genes in Fusarium graminearum, F-culmorum and F-pseudograminearium and identification of NPS2 as the producer of ferricrocin
Carsten Tobiasen et al.
CURRENT GENETICS (2007)
Functional characterization, sequence comparisons and distribution of a polyketide synthase gene required for perithecial pigmentation in some Fusarium species
R. H. Proctor et al.
FOOD ADDITIVES AND CONTAMINANTS PART A-CHEMISTRY ANALYSIS CONTROL EXPOSURE & RISK ASSESSMENT (2007)
Production of mutagenic metabolites by Metarhizium anisopliae
Stuart B. Krasnoff et al.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2006)
Secondary metabolite toxins and nutrition of plant pathogenic fungi
Barbara J. Howlett
CURRENT OPINION IN PLANT BIOLOGY (2006)
A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors
Hildur V. Colot et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
AUGUSTUS:: ab initio prediction of alternative transcripts
Mario Stanke et al.
NUCLEIC ACIDS RESEARCH (2006)
Fumonisin production in the maize pathogen Fusarium verticillioides: Genetic basis of naturally occurring chemical variation
RH Proctor et al.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2006)
Biochemical and molecular analyses of gibberellin biosynthesis in fungi
H Kawaide
BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY (2006)
Sequencing of Aspergillus nidulans and comparative analysis with A-fumigatus and A-oryzae
JE Galagan et al.
NATURE (2005)
Functional analysis of the polyketide synthase genes in the filamentous fungus Gibberella zeae (Anamorph Fusarium graminearum)
I Gaffoor et al.
EUKARYOTIC CELL (2005)
De novo identification of repeat families in large genomes
AL Price et al.
BIOINFORMATICS (2005)
Distribution of gibberellin biosynthetic genes and gibberellin production in the Gibberella fujikuroi species complex
S Malonek et al.
PHYTOCHEMISTRY (2005)
Gibberella xylatioides (anamorph : Fusarium xylarioides), a causative agent of coffee wilt disease in Africa, is a previously unrecognized member of the G. fujikuroi species complex
DM Geiser et al.
MYCOLOGIA (2005)
Repbase update, a database of eukaryotic repetitive elements
J Jurka et al.
CYTOGENETIC AND GENOME RESEARCH (2005)
GFP as a tool to analyze the organization, dynamics and function of nuclei and microtubules in Neurospora crassa
M Freitag et al.
FUNGAL GENETICS AND BIOLOGY (2004)
Open mass spectrometry search algorithm
LY Geer et al.
JOURNAL OF PROTEOME RESEARCH (2004)
Discontinuous distribution of fumonisin biosynthetic genes in the Gibberella fujikuroi species complex
RH Proctor et al.
MYCOLOGICAL RESEARCH (2004)
Mauve: Multiple alignment of conserved genomic sequence with rearrangements
ACE Darling et al.
GENOME RESEARCH (2004)
TANDEM: matching proteins with tandem mass spectra
R Craig et al.
BIOINFORMATICS (2004)
The NADPH-cytochrome P450 reductase gene from Gibberella fujikuroi is essential for gibberellin biosynthesis
S Malonek et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes
A Ruepp et al.
NUCLEIC ACIDS RESEARCH (2004)
Phylogenomic analysis of type I polyketide synthase genes in pathogenic and saprobic ascomycetes
S Kroken et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Exploration, normalization, and summaries of high density oligonucleotide array probe level data
RA Irizarry et al.
BIOSTATISTICS (2003)
AREA directly mediates nitrogen regulation of gibberellin biosynthesis in Gibberella fujikuroi, but its activity is not affected by NMR
M Mihlan et al.
MOLECULAR MICROBIOLOGY (2003)
The polyketide synthase gene pks4 from Gibberella fujikuroi encodes a key enzyme in the blosynthesis of the red pigment bikaverin
P Linnemannstöns et al.
FUNGAL GENETICS AND BIOLOGY (2002)
The Generic Genome Browser: A building block for a model organism system database
LD Stein et al.
GENOME RESEARCH (2002)
Fast algorithms for large-scale genome alignment and comparison
AL Delcher et al.
NUCLEIC ACIDS RESEARCH (2002)
Host-selective toxins as agents of cell death in plant-fungus interactions
Jonathan E. Markham et al.
MOLECULAR PLANT PATHOLOGY (2001)
A new mathematical model for relative quantification in real-time RT-PCR
MW Pfaffl
NUCLEIC ACIDS RESEARCH (2001)
Genes determining pathogenicity to pea are clustered on a supernumerary chromosome in the fungal plant pathogen Nectria haematococca
YN Han et al.
PLANT JOURNAL (2001)
Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
A Krogh et al.
JOURNAL OF MOLECULAR BIOLOGY (2001)
Predicting subcellular localization of proteins based on their N-terminal amino acid sequence
O Emanuelsson et al.
JOURNAL OF MOLECULAR BIOLOGY (2000)
Ab initio gene finding in Drosophila genomic DNA
AA Salamov et al.
GENOME RESEARCH (2000)
分享论文
