相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Metagenomic Profiling of a Microbial Assemblage Associated with the California Mussel: A Node in Networks of Carbon and Nitrogen Cycling
Catherine A. Pfister et al.
PLOS ONE (2010)
DNAPlotter: circular and linear interactive genome visualization
Tim Carver et al.
BIOINFORMATICS (2009)
Lessons from the cow: What the ruminant animal can teach us about consolidated bioprocessing of cellulosic biomass
Paul J. Weimer et al.
BIORESOURCE TECHNOLOGY (2009)
Hydrolytic enzymes of leaf-cutting ant fungi
Milton Erthal et al.
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY (2009)
Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models
Arthur Brady et al.
NATURE METHODS (2009)
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics
Brandi L. Cantarel et al.
NUCLEIC ACIDS RESEARCH (2009)
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
J. R. Cole et al.
NUCLEIC ACIDS RESEARCH (2009)
Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases
Jennifer M. Brulc et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Symbiotic Nitrogen Fixation in the Fungus Gardens of Leaf-Cutter Ants
Adrian A. Pinto-Tomas et al.
SCIENCE (2009)
Effect of monensin feeding and withdrawal on populations of individual bacterial species in the rumen of lactating dairy cows fed high-starch rations
Paul J. Weimer et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2008)
Towards a molecular understanding of symbiont function: Identification of a fungal gene for the degradation of xylan in the fungus gardens of leaf-cutting ants
Morten Schiott et al.
BMC MICROBIOLOGY (2008)
Functional metagenomic profiling of nine biomes
Elizabeth A. Dinsdale et al.
NATURE (2008)
被撤回的出版物: Plant genetic engineering for biofuel production: towards affordable cellulosic ethanol (Retracted article. See vol 11, pg 308, 2010)
Mariam B. Sticklen
NATURE REVIEWS GENETICS (2008)
Comparative Metagenomics Reveals Host Specific Metavirulomes and Horizontal Gene Transfer Elements in the Chicken Cecum Microbiome
Ani Qu et al.
PLOS ONE (2008)
Evolution of mammals and their gut microbes
Ruth E. Ley et al.
SCIENCE (2008)
Diversity and activity of cellulose-decomposing bacteria, isolated from a sandy and a loamy soil after long-term manure application
Andreas Ulrich et al.
MICROBIAL ECOLOGY (2008)
The Pfam protein families database
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2008)
SILVA:: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
Elmar Pruesse et al.
NUCLEIC ACIDS RESEARCH (2007)
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
Falk Warnecke et al.
NATURE (2007)
Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes
Ken Kurokawa et al.
DNA RESEARCH (2007)
Quantitative phylogenetic assessment of microbial communities in diverse environments
C. von Mering et al.
SCIENCE (2007)
The Sorcerer II Global Ocean Sampling expedition: Northwest Atlantic through Eastern Tropical Pacific
Douglas B. Rusch et al.
PLOS BIOLOGY (2007)
CDD: a conserved domain database for interactive domain family analysis
Aron Marchler-Bauer et al.
NUCLEIC ACIDS RESEARCH (2007)
An obesity-associated gut microbiome with increased capacity for energy harvest
Peter J. Turnbaugh et al.
NATURE (2006)
Clearcut: a fast implementation of relaxed neighbor joining
Luke Sheneman et al.
BIOINFORMATICS (2006)
Symbiosis insights through metagenomic analysis of a microbial consortium
Tanja Woyke et al.
NATURE (2006)
Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities
Hector Garcia Martin et al.
NATURE BIOTECHNOLOGY (2006)
New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras
Kevin E. Ashelford et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
UniFrac - An online tool for comparing microbial community diversity in a phylogenetic context
Catherine Lozupone et al.
BMC BIOINFORMATICS (2006)
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
T. Z. DeSantis et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Metagenomic analysis of the human distal gut microbiome
Steven R. Gill et al.
SCIENCE (2006)
GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses
J Besemer et al.
NUCLEIC ACIDS RESEARCH (2005)
Comparative metagenomics of microbial communities
SG Tringe et al.
SCIENCE (2005)
RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees
A Stamatakis et al.
BIOINFORMATICS (2005)
ARB:: a software environment for sequence data
W Ludwig et al.
NUCLEIC ACIDS RESEARCH (2004)
Bellerophon: a program to detect chimeric sequences in multiple sequence alignments
T Huber et al.
BIOINFORMATICS (2004)
Census of the bacterial community of the gypsy moth larval midgut by using culturing and culture-independent methods
NA Broderick et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)
Seasonal changes in an alpine soil bacterial community in the Colorado Rocky Mountains
DA Lipson et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)
Evidence that the fungus cultured by leaf-cutting ants does not metabolize cellulose
AB Abril et al.
ECOLOGY LETTERS (2002)
Weeding and grooming of pathogens in agriculture by ants
CR Currie et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2001)
Phylogenetic structure of unusual aquatic microbial formations in Nullarbor caves, Australia
AJ Holmes et al.
ENVIRONMENTAL MICROBIOLOGY (2001)
The COG database: a tool for genome-scale analysis of protein functions and evolution
RL Tatusov et al.
NUCLEIC ACIDS RESEARCH (2000)