相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5′ terminal nucleotide
Shijun Mi et al.
CELL (2008)
RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
John C. Marioni et al.
GENOME RESEARCH (2008)
Mapping and quantifying mammalian transcriptomes by RNA-Seq
Ali Mortazavi et al.
NATURE METHODS (2008)
The transcriptional landscape of the yeast genome defined by RNA sequencing
Ugrappa Nagalakshmi et al.
SCIENCE (2008)
Single-molecule DNA sequencing of a viral genome
Timothy D. Harris et al.
SCIENCE (2008)
The miR-17-5p microRNA is a key regulator of the G1/S phase cell cycle transition
Nicole Cloonan et al.
GENOME BIOLOGY (2008)
Gene Ontology annotations at SGD: new data sources and annotation methods
Eurie L. Hong et al.
NUCLEIC ACIDS RESEARCH (2008)
A high- resolution atlas of nucleosome occupancy in yeast
William Lee et al.
NATURE GENETICS (2007)
Sampling the arabidopsis transcriptome with massively parallel pyrosequencing
Andreas P. M. Weber et al.
PLANT PHYSIOLOGY (2007)
Gene discovery and annotation using LCM-454 transcriptome sequencing
Scott J. Emrich et al.
GENOME RESEARCH (2007)
A large-scale full-length cDNA analysis to explore the budding yeast transcriptome
Fumihito Miura et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Transcript mapping with high-density oligonucleotide tiling arrays
Wolfgang Huber et al.
BIOINFORMATICS (2006)
Silencing the transcriptome's dark matter: Mechanisms for suppressing translation of intergenic transcripts
Kellie S. Bickel et al.
MOLECULAR CELL (2006)
A high-resolution map of transcription in the yeast genome
L David et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Functional genomics of genes with small open reading frames (sORFs) in S-cerevisiae
JP Kastenmayer et al.
GENOME RESEARCH (2006)
Accumulation of unstable promoter-associated transcripts upon loss of the nuclear exosome subunit Rrp6p in Saccharomyces cerevisiae
CA Davis et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Genome-wide transcription analyses in rice using tiling microarrays
L Li et al.
NATURE GENETICS (2006)
Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome
Jodi E. Hirschman et al.
NUCLEIC ACIDS RESEARCH (2006)
Contributions of Trf4p- and Trf5p-dependent polyadenylation to the processing and degradative functions of the yeast nuclear exosome
DE Egecioglu et al.
RNA (2006)
CUTting genetic noise by polyadenylation-induced RNA degradation
GF Chanfreau
TRENDS IN CELL BIOLOGY (2005)
Trf4 and trf5 proteins of Saccharomyces cerevisiae exhibit poly(A) RNA polymerase activity but no DNA polymerase activity
L Haracska et al.
MOLECULAR AND CELLULAR BIOLOGY (2005)
Accurate multiplex polony sequencing of an evolved bacterial genome
J Shendure et al.
SCIENCE (2005)
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
A Siepel et al.
GENOME RESEARCH (2005)
Cryptic Pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase
F Wyers et al.
CELL (2005)
Toward the $1000 human genome
ST Bennett et al.
PHARMACOGENOMICS (2005)
Vector-capping: A simple method for preparing a high-quality full-length cDNA library
S Kato et al.
DNA RESEARCH (2005)
Rfam: annotating non-coding RNAs in complete genomes
S Griffiths-Jones et al.
NUCLEIC ACIDS RESEARCH (2005)
Determination of the capped site sequence of mRNA based on the detection of cap-dependent nucleotide addition using an anchor ligation method
H Ohtake et al.
DNA RESEARCH (2004)
Global identification of human transcribed sequences with genome tiling arrays
P Bertone et al.
SCIENCE (2004)
GO::TermFinder - open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes
EI Boyle et al.
BIOINFORMATICS (2004)
A comprehensive transcript index of the human genome generated using microarrays and computational approaches
EE Schadt et al.
GENOME BIOLOGY (2004)
Versatile and open software for comparing large genomes
S Kurtz et al.
GENOME BIOLOGY (2004)
Bioconductor: open software development for computational biology and bioinformatics
RC Gentleman et al.
GENOME BIOLOGY (2004)
Empirical analysis of transcriptional activity in the Arabidopsis genome
K Yamada et al.
SCIENCE (2003)
Degradation of normal mRNA in the nucleus of Saccharomyces cerevisiae
B Das et al.
MOLECULAR AND CELLULAR BIOLOGY (2003)
Computational identification of non-coding RNAs in Saccharomyces cerevisiae by comparative genomics
JP McCutcheon et al.
NUCLEIC ACIDS RESEARCH (2003)
Finding functional features in Saccharomyces genomes by phylogenetic footprinting
P Cliften et al.
SCIENCE (2003)
Genomewide demarcation of RNA polymerase II transcription units revealed by physical fractionation of chromatin
PL Nagy et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Sequencing and comparison of yeast species to identify genes and regulatory elements
M Kellis et al.
NATURE (2003)
Systematic discovery of new genes in the Saccharomyces cerevisiae genome
MM Kessler et al.
GENOME RESEARCH (2003)
Rfam: an RNA family database
S Griffiths-Jones et al.
NUCLEIC ACIDS RESEARCH (2003)
Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii
S Brachat et al.
GENOME BIOLOGY (2003)
Parallel identification of new genes in Saccharomyces cerevisiae
G Oshiro et al.
GENOME RESEARCH (2002)
Processing of 3′-extended read-through transcripts by the exosome can generate functional mRNAs
C Torchet et al.
MOLECULAR CELL (2002)
How many protein-coding genes are there in the Saccharomyces cerevisiae genome?
P Mackiewicz et al.
YEAST (2002)
An integrated approach for finding overlooked genes in yeast
A Kumar et al.
NATURE BIOTECHNOLOGY (2002)
The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes
JM Coller et al.
RNA (2001)
Targeting an mRNA for decapping: Displacement of translation factors and association of the Lsm1p-7p complex on deadenylated yeast mRNAs
S Tharun et al.
MOLECULAR CELL (2001)
Quality control of mRNA 3′-end processing is linked to the nuclear exosome
P Hilleren et al.
NATURE (2001)
Experimental annotation of the human genome using microarray technology
DD Shoemaker et al.
NATURE (2001)
Identification of a regulated pathway for nuclear pre-mRNA turnover
C Bousquet-Antonelli et al.
CELL (2000)
The two proteins Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p
C Bonnerot et al.
MOLECULAR AND CELLULAR BIOLOGY (2000)
Recognition of protein coding genes in the yeast genome at better than 95% accuracy based an the Z curve
CT Zhang et al.
NUCLEIC ACIDS RESEARCH (2000)
The yeast antiviral proteins Ski2p, Ski3p, and Ski8p exist as a complex in vivo
JT Brown et al.
RNA (2000)
Yeast Sm-like proteins function in mRNA decapping and decay
S Tharun et al.
NATURE (2000)
A nuclear 3 '-5 ' exonuclease involved in mRNA degradation interacts with poly(A) polymerase and the hnRNA protein Npl3p
KTD Burkard et al.
MOLECULAR AND CELLULAR BIOLOGY (2000)
分享论文
