相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。High-performance metabolic profiling with dual chromatography-Fourier-transform mass spectrometry (DC-FTMS) for study of the exposome
Quinlyn A. Soltow et al.
METABOLOMICS (2013)
Mass appeal: metabolite identification in mass spectrometry-focused untargeted metabolomics
Warwick B. Dunn et al.
METABOLOMICS (2013)
MetaboLights-an open-access general-purpose repository for metabolomics studies and associated meta-data
Kenneth Haug et al.
NUCLEIC ACIDS RESEARCH (2013)
Annotation of the Human Adult Urinary Metabolome and Metabolite Identification Using Ultra High Performance Liquid Chromatography Coupled to a Linear Quadrupole Ion Trap-Orbitrap Mass Spectrometer
Aurelie Roux et al.
ANALYTICAL CHEMISTRY (2012)
Cellular Metabolism and Disease: What Do Metabolic Outliers Teach Us?
Ralph J. DeBerardinis et al.
CELL (2012)
Orchestration of Metabolism by Macrophages
Subhra K. Biswas et al.
CELL METABOLISM (2012)
Model-driven multi-omic data analysis elucidates metabolic immunomodulators of macrophage activation
Aarash Bordbar et al.
MOLECULAR SYSTEMS BIOLOGY (2012)
An accelerated workflow for untargeted metabolomics using the METLIN database
Ralf Tautenhahn et al.
NATURE BIOTECHNOLOGY (2012)
Metabolomics: the apogee of the omics trilogy
Gary J. Patti et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2012)
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
Ron Caspi et al.
NUCLEIC ACIDS RESEARCH (2012)
Detailed Mitochondrial Phenotyping by High Resolution Metabolomics
James R. Roede et al.
PLOS ONE (2012)
High-performance metabolic profiling of plasma from seven mammalian species for simultaneous environmental chemical surveillance and bioeffect monitoring
Youngja H. Park et al.
TOXICOLOGY (2012)
Reconstruction of Genome-Scale Active Metabolic Networks for 69 Human Cell Types and 16 Cancer Types Using INIT
Rasmus Agren et al.
PLOS COMPUTATIONAL BIOLOGY (2012)
A multi-tissue type genome-scale metabolic network for analysis of whole-body systems physiology
Aarash Bordbar et al.
BMC SYSTEMS BIOLOGY (2011)
Bridging Innate and Adaptive Immunity
William E. Paul
CELL (2011)
Riboneogenesis in Yeast
Michelle F. Clasquin et al.
CELL (2011)
Nitric oxide: A regulator of eukaryotic initiation factor 2 kinases
Lingying Tong et al.
FREE RADICAL BIOLOGY AND MEDICINE (2011)
Web-based inference of biological patterns, functions and pathways from metabolomic data using MetaboAnalyst
Jianguo Xia et al.
NATURE PROTOCOLS (2011)
Divergent Effects of Human Cytomegalovirus and Herpes Simplex Virus-1 on Cellular Metabolism
Livia Vastag et al.
PLOS PATHOGENS (2011)
Metabolomic Analysis and Visualization Engine for LC-MS Data
Eugene Melamud et al.
ANALYTICAL CHEMISTRY (2010)
Metscape: a Cytoscape plug-in for visualizing and interpreting metabolomic data in the context of human metabolic networks
Jing Gao et al.
BIOINFORMATICS (2010)
MetPA: a web-based metabolomics tool for pathway analysis and visualization
Jianguo Xia et al.
BIOINFORMATICS (2010)
NeMo: Network Module identification in Cytoscape
Corban G. Rivera et al.
BMC BIOINFORMATICS (2010)
MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
Tomas Pluskal et al.
BMC BIOINFORMATICS (2010)
A detailed genome-wide reconstruction of mouse metabolism based on human Recon 1
Martin I. Sigurdsson et al.
BMC SYSTEMS BIOLOGY (2010)
Reconstruction and flux-balance analysis of the Plasmodium falciparum metabolic network
German Plata et al.
MOLECULAR SYSTEMS BIOLOGY (2010)
High-throughput generation, optimization and analysis of genome-scale metabolic models
Christopher S. Henry et al.
NATURE BIOTECHNOLOGY (2010)
A protocol for generating a high-quality genome-scale metabolic reconstruction
Ines Thiele et al.
NATURE PROTOCOLS (2010)
MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks
Ludovic Cottret et al.
NUCLEIC ACIDS RESEARCH (2010)
Interpreting Metabolomic Profiles using Unbiased Pathway Models
Rahul C. Deo et al.
PLOS COMPUTATIONAL BIOLOGY (2010)
Constructing a fish metabolic network model
Shuzhao Li et al.
GENOME BIOLOGY (2010)
Mass spectrometry tools and metabolite-specific databases for molecular identification in metabolomics
M. Brown et al.
ANALYST (2009)
Probabilistic assignment of formulas to mass peaks in metabolomics experiments
Simon Rogers et al.
BIOINFORMATICS (2009)
apLCMS-adaptive processing of high-resolution LC/MS data
Tianwei Yu et al.
BIOINFORMATICS (2009)
Applications of genome-scale metabolic reconstructions
Matthew A. Oberhardt et al.
MOLECULAR SYSTEMS BIOLOGY (2009)
Extracellular redox modulation by regulatory T cells
Zhonghua Yan et al.
NATURE CHEMICAL BIOLOGY (2009)
Systems biology approach predicts immunogenicity of the yellow fever vaccine in humans
Troy D. Querec et al.
NATURE IMMUNOLOGY (2009)
HMDB: a knowledgebase for the human metabolome
David S. Wishart et al.
NUCLEIC ACIDS RESEARCH (2009)
Unbiased Reconstruction of a Mammalian Transcriptional Network Mediating Pathogen Responses
Ido Amit et al.
SCIENCE (2009)
Metabolomics: A global biochemical approach to drug response and disease
Rima Kaddurah-Daouk et al.
ANNUAL REVIEW OF PHARMACOLOGY AND TOXICOLOGY (2008)
Identifying functional modules in protein-protein interaction networks:: an integrated exact approach
Marcus T. Dittrich et al.
BIOINFORMATICS (2008)
Metabolite identification via the Madison Metabolomics Consortium Database
Qiu Cui et al.
NATURE BIOTECHNOLOGY (2008)
New surveyor tools for charting microbial metabolic maps
Rainer Breitling et al.
NATURE REVIEWS MICROBIOLOGY (2008)
Seven Golden Rules for heuristic filtering of molecular formulas obtained by accurate mass spectrometry
Tobias Kind et al.
BMC BIOINFORMATICS (2007)
Global reconstruction of the human metabolic network based on genomic and bibliomic data
Natalie C. Duarte et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Modularity and community structure in networks
M. E. J. Newman
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Metabolomic database annotations via query of elemental compositions:: Mass accuracy is insufficient even at less than 1 ppm
Tobias Kind et al.
BMC BIOINFORMATICS (2006)
Yellow fever vaccine YF-17D activates multiple dendritic cell subsets via TLR2, 7, 8, and 9 to stimulate polyvalent immunity
T Querec et al.
JOURNAL OF EXPERIMENTAL MEDICINE (2006)
XCMS: Processing mass spectrometry data for metabolite profiling using Nonlinear peak alignment, matching, and identification
CA Smith et al.
ANALYTICAL CHEMISTRY (2006)
From genomics to chemical genomics: new developments in KEGG
Minoru Kanehisa et al.
NUCLEIC ACIDS RESEARCH (2006)
METLIN - A metabolite mass spectral database
CA Smith et al.
THERAPEUTIC DRUG MONITORING (2005)
Regulation of immune responses by L- arginine metabolism
V Bronte et al.
NATURE REVIEWS IMMUNOLOGY (2005)
Finding and evaluating community structure in networks
MEJ Newman et al.
PHYSICAL REVIEW E (2004)
Decomposition of metabolic network into functional modules based on the global connectivity structure of reaction graph
HW Ma et al.
BIOINFORMATICS (2004)
Characterizing gene sets with FuncAssociate
GF Berriz et al.
BIOINFORMATICS (2003)
TN/iNOS-producing dendritic cells mediate innate immune defense against bacterial infection
NV Serbina et al.
IMMUNITY (2003)
Identifying biological themes within lists of genes with EASE
DA Hosack et al.
GENOME BIOLOGY (2003)
Hierarchical organization of modularity in metabolic networks
E Ravasz et al.
SCIENCE (2002)
Antigen-presenting dendritic cells provide the reducing extracellular microenvironment required for T lymphocyte activation
G Angelini et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
Expression of an altered ribonucleotide reductase activity associated with the replication of murine cytomegalovirus in quiescent fibroblasts
D Lembo et al.
JOURNAL OF VIROLOGY (2000)
Murine cytomegalovirus stimulates cellular thymidylate synthase gene expression in quiescent cells and requires the enzyme for replication
G Gribaudo et al.
JOURNAL OF VIROLOGY (2000)
分享论文
