相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Protein folding dynamics: The diffusion-collision model and experimental data
Martin Karplus et al.
PROTEIN SCIENCE (2010)
Rate of loop formation in peptides: A simulation study
Matthias J. Feige et al.
JOURNAL OF MOLECULAR BIOLOGY (2008)
Role of backbone - Solvent interactions in determining conformational equilibria of intrinsically disordered proteins
Hoang T. Tran et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2008)
Probing polyproline structure and dynamics by photoinduced electron transfer provides evidence for deviations from a regular polyproline type II helix
Soeren Doose et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Dehydration-driven solvent exposure of hydrophobic surfaces as a driving force in peptide folding
Isabella Daidone et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
A pre-existing hydrophobic collapse in the unfolded state of an ultrafast folding protein
K. Hun Mok et al.
NATURE (2007)
A natively unfolded yeast prion monomer adopts an ensemble of collapsed and rapidly fluctuating structures
Samrat Mukhopadhyay et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Loop formation in unfolded polypeptide chains on the picoseconds to microseconds time scale
Beat Fierz et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Characterizing the unfolded states of proteins using single-molecule FRET spectroscopy and molecular simulations
Kusai A. Merchant et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Dynamics of unfolded polypeptide chains in crowded environment studied by fluorescence correlation spectroscopy
Hannes Neuweiler et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
Mapping protein collapse with single-molecule fluorescence and kinetic synchrotron radiation circular dichroism spectroscopy
Armin Hoffmann et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Kinetics of internal-loop formation in polypeptide chains: A simulation study
Dana Doucet et al.
BIOPHYSICAL JOURNAL (2007)
Fluorescence correlation spectroscopy shows that monomeric polyglutamine molecules form collapsed structures in aqueous solutions
Scott L. Crick et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
A backbone-based theory of protein folding
George D. Rose et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
End-to-end distance distributions and intrachain diffusion constants in unfolded polypeptide chains indicate intramolecular hydrogen bond formation
Andreas Moglich et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Coil-globule transition in the denatured state of a small protein
Eilon Sherman et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Effects of denaturants on the dynamics of loop formation in polypeptides
Marco Buscaglia et al.
BIOPHYSICAL JOURNAL (2006)
Probing structural heterogeneities and fluctuations of nucleic acids and denatured proteins
TA Laurence et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
A microscopic view of miniprotein folding: Enhanced folding efficiency through formation of an intermediate
H Neuweiler et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
A close look at fluorescence quenching of organic dyes by tryptophan
S Doose et al.
CHEMPHYSCHEM (2005)
Theoretical characterization of α-helix and β-hairpin folding kinetics
I Daidone et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2005)
Protein folding: The stepwise assembly of foldon units
H Maity et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
The N-terminal to C-terminal motif in protein folding and function
MMG Krishna et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
The protein folding 'speed limit'
J Kubelka et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2004)
Reassessing random-coil statistics in unfolded proteins
NC Fitzkee et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Random-coil behavior and the dimensions of chemically unfolded proteins
JE Kohn et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Structural and dynamic properties of the CAGQW peptide in water: A molecular dynamics simulation study using different force fields
D Roccatano et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2004)
Fluorescence quenching of dyes by tryptophan: Interactions at atomic detail from combination of experiment and computer simulation
AC Vaiana et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2003)
How fast is protein hydrophobic collapse?
M Sadqi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Dynamics of unfolded polypeptide chains as model for the earliest steps in protein folding
F Krieger et al.
JOURNAL OF MOLECULAR BIOLOGY (2003)
Peptide folding simulations
S Gnanakaran et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2003)
The protein-folding speed limit:: Intrachain diffusion times set by electron-transfer rates in denatured Ru(NH3)5(His-33)-Zn-cytochrome c
IJ Chang et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Absolute comparison of simulated and experimental protein-folding dynamics
CD Snow et al.
NATURE (2002)
Native-like mean structure in the unfolded ensemble of small proteins
B Zagrovic et al.
JOURNAL OF MOLECULAR BIOLOGY (2002)
Rate of intramolecular contact formation in peptides: The loop length dependence
ZS Wang et al.
JOURNAL OF CHEMICAL PHYSICS (2002)
Polyproline II structure in a sequence of seven alanine residues
ZS Shi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
Peptide loop-closure kinetics from microsecond molecular dynamics simulations in explicit solvent
IC Yeh et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2002)
Protein and peptide folding explored with molecular simulations
CL Brooks
ACCOUNTS OF CHEMICAL RESEARCH (2002)
Protein folding and unfolding at atomic resolution
AR Fersht et al.
CELL (2002)
A fluorescence-based method for direct measurement of submicrosecond intramolecular contact formation in biopolymers: An exploratory study with polypeptides
RR Hudgins et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2002)
Evaluation and reparametrization of the OPLS-AA force field for proteins via comparison with accurate quantum chemical calculations on peptides
GA Kaminski et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2001)
Quantification of the hydrophobic interaction by simulations of the aggregation of small hydrophobic solutes in water
TM Raschke et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
Folding simulations of a three-stranded antiparallel β-sheet peptide
P Ferrara et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)
Understanding protein folding via free-energy surfaces from theory and experiment
AR Dinner et al.
TRENDS IN BIOCHEMICAL SCIENCES (2000)
Measuring the rate of intramolecular contact formation in polypeptides
LJ Lapidus et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)
分享论文
