相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Genome-wide identification and analysis of small RNAs originated from natural antisense transcripts in Oryza sativa
Xuefeng Zhou et al.
GENOME RESEARCH (2009)
Selection and mutation on microRNA target sequences during rice evolution
Xingyi Guo et al.
BMC GENOMICS (2008)
Characterization of paralogous protein families in rice
Haining Lin et al.
BMC PLANT BIOLOGY (2008)
A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
Qian-Hao Zhu et al.
GENOME RESEARCH (2008)
Genomics - Protein fossils live on as RNA
Rajkumar Sasidharan et al.
NATURE (2008)
Drosophila endogenous small RNAs bind to Argonaute 2 in somatic cells
Yoshinori Kawamura et al.
NATURE (2008)
The Drosophila hairpin RNA pathway generates endogenous short interfering RNAs
Katsutomo Okamura et al.
NATURE (2008)
Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes
Toshiaki Watanabe et al.
NATURE (2008)
Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes
Oliver H. Tam et al.
NATURE (2008)
Characterization of Unique Small RNA Populations from Rice Grain
Sara E. Heisel et al.
PLOS ONE (2008)
Molecular biology - Slicing and dicing for small RNAs
James A. Birchler et al.
SCIENCE (2008)
Physcomitrella patens DCL3 Is Required for 22-24 nt siRNA Accumulation, Suppression of Retrotransposon-Derived Transcripts, and Normal Development
Sung Hyun Cho et al.
PLOS GENETICS (2008)
A novel class of bacteria-induced small RNAs in Arabidopsis
Surekha Katiyar-Agarwal et al.
GENES & DEVELOPMENT (2007)
The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race
Alexei A. Aravin et al.
SCIENCE (2007)
Patterns of selective constraints in noncoding DNA of rice
Xingyi Guo et al.
BMC EVOLUTIONARY BIOLOGY (2007)
Targets of RNA-directed DNA methylation
Marjori Matzke et al.
CURRENT OPINION IN PLANT BIOLOGY (2007)
RNAi-dependent and -independent RNA turnover mechanisms contribute to heterochromatic gene silencing
Marc Buehler et al.
CELL (2007)
The ambiguous boundary between genes and pseudogenes: the dead rise up, or do they?
Deyou Zheng et al.
TRENDS IN GENETICS (2007)
A role for Piwi and piRNAs in germ cell maintenance and transposon silencing in zebrafish
Saskia Houwing et al.
CELL (2007)
An expression atlas of rice mRNAs and small RNAs
Kan Nobuta et al.
NATURE BIOTECHNOLOGY (2007)
Genome-wide profiling and analysis of Arabidopsis siRNAs
Kristin D. Kasschau et al.
PLOS BIOLOGY (2007)
Pseudogene.org: a comprehensive database and comparison platform for pseudogene annotation
John E. Karro et al.
NUCLEIC ACIDS RESEARCH (2007)
CSRDB: a small RNA integrated database and browser resource for cereals
Cameron Johnson et al.
NUCLEIC ACIDS RESEARCH (2007)
Pseudogenes in the ENCODE regions: Consensus annotation, analysis of transcription, and evolution
Deyou Zheng et al.
GENOME RESEARCH (2007)
Retrotranspositions in orthologous regions of closely related grass species
Chunguang Du et al.
BMC EVOLUTIONARY BIOLOGY (2006)
The Xist RNA gene evolved in eutherians by pseudogenization of a protein-coding gene
L Duret et al.
SCIENCE (2006)
PseudoPipe: an automated pseudogene identification pipeline
Zhaolei Zhang et al.
BIOINFORMATICS (2006)
The diversity of RNA silencing pathways in plants
Peter Brodersen et al.
TRENDS IN GENETICS (2006)
Genome-wide survey for biologically functional pseudogenes
Orjan Svensson et al.
PLOS COMPUTATIONAL BIOLOGY (2006)
Post-transcriptional small RNA pathways in plants: mechanisms and regulations
H Vaucheret
GENES & DEVELOPMENT (2006)
Pseudo-messenger RNA: Phantoms of the transcriptome
Martin C. Frith et al.
PLOS GENETICS (2006)
Arabidopsis endogenous small RNAs: highways and byways
Franck Vazquez
TRENDS IN PLANT SCIENCE (2006)
A computational approach for identifying pseudogenes in the ENCODE regions
Deyou Zheng et al.
GENOME BIOLOGY (2006)
Intron gain and loss in segmentally duplicated genes in rice
Haining Lin et al.
GENOME BIOLOGY (2006)
Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis
O Borsani et al.
CELL (2005)
The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications -: art. no. 20
N Choisne et al.
BMC BIOLOGY (2005)
Ribo-gnome: The big world of small RNAs
PD Zamore et al.
SCIENCE (2005)
The map-based sequence of the rice genome
T Matsumoto et al.
NATURE (2005)
Integrated pseudogene annotation for human chromosome 22: Evidence for transcription
DY Zheng et al.
JOURNAL OF MOLECULAR BIOLOGY (2005)
Gardening the genome:: DNA methylation in Arabidopsis thaliana
SWL Chan et al.
NATURE REVIEWS GENETICS (2005)
Duplication and DNA segmental loss in the rice genome: implications for diploidization
XY Wang et al.
NEW PHYTOLOGIST (2005)
Timed and targeted differential regulation of nitric oxide synthase (NOS) and anti-NOS genes by reward conditioning leading to long-term memory formation
SA Korneev et al.
JOURNAL OF NEUROSCIENCE (2005)
The Genomes of Oryza sativa:: A history of duplications
J Yu et al.
PLOS BIOLOGY (2005)
Transcribed processed pseudogenes in the human genome: an intermediate form of expressed retrosequence lacking protein-coding ability
PM Harrison et al.
NUCLEIC ACIDS RESEARCH (2005)
Type I MADS-box genes have experienced faster birth-and-death evolution than type II MADS-box genes in angiosperms
J Nam et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
MicroRNAs: Genomics, biogenesis, mechanism, and function
DP Bartel
CELL (2004)
Large-scale analysis of pseudogenes in the human genome
ZL Zhang et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2004)
A new role for expressed pseudogenes as ncRNA: regulation of mRNA stability of its homologous coding gene
Y Yano et al.
JOURNAL OF MOLECULAR MEDICINE-JMM (2004)
Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thaliana
E Allen et al.
NATURE GENETICS (2004)
Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics
AH Paterson et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Comparative genomics of rice and Arabidopsis. Analysis of 727 cytochrome P450 genes and pseudogenes from a monocot and a dicot
DR Nelson et al.
PLANT PHYSIOLOGY (2004)
Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs
F Vazquez et al.
MOLECULAR CELL (2004)
SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis
A Peragine et al.
GENES & DEVELOPMENT (2004)
Millions of years of evolution preserved: A comprehensive catalog of the processed pseudogenes in the human genome
ZL Zhang et al.
GENOME RESEARCH (2003)
Evolution of nitric oxide synthase regulatory genes by DNA inversion
S Korneev et al.
MOLECULAR BIOLOGY AND EVOLUTION (2002)
Birth and death of duplicated genes in completely sequenced eukaryotes
A Wagner
TRENDS IN GENETICS (2001)
Active retrotransposons are a common feature of grass genomes
CM Vicient et al.
PLANT PHYSIOLOGY (2001)
The evolutionary fate and consequences of duplicate genes
M Lynch et al.
SCIENCE (2000)
Vertebrate pseudogenes
AJ Mighell et al.
FEBS LETTERS (2000)
分享论文
