期刊
STANDARDS IN GENOMIC SCIENCES
卷 9, 期 3, 页码 449-461出版社
BMC
DOI: 10.4056/sigs.4648353
关键词
cold adapted; acidophile; tundra soil; Acidobacteria
资金
- Office of Science of the US Department of Energy [DE-AC02-05CH11231]
- Academy of Finland
- New Jersey Agricultural Experiment Station
Granulicella tundricola strain MP5ACTX9(T) is a novel species of the genus Granulicella in subdivision 1 Acidobacteria. G. tundricola is a predominant member of soil bacterial communities, active at low temperatures and nutrient limiting conditions in Arctic alpine tundra. The organism is a cold-adapted acidophile and a versatile heterotroph that hydrolyzes a suite of sugars and complex polysaccharides. Genome analysis revealed metabolic versatility with genes involved in metabolism and transport of carbohydrates, including gene modules encoding for the carbohydrate-active enzyme (CAZy) families for the breakdown, utilization and biosynthesis of diverse structural and storage polysaccharides such as plant based carbon polymers. The genome of G. tundricola strain MP5ACTX9(T) consists of 4,309,151 bp of a circular chromosome and five mega plasmids with a total genome content of 5,503,984 bp. The genome comprises 4,705 protein-coding genes and 52 RNA genes.
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