4.7 Article

GOGO: An improved algorithm to measure the semantic similarity between gene ontology terms

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemical Research Methods

A-DaGO-Fun: an adaptable Gene Ontology semantic similarity-based functional analysis tool

Gaston K. Mazandu et al.

BIOINFORMATICS (2016)

Article Biochemical Research Methods

A large-scale evaluation of computational protein function prediction

Predrag Radivojac et al.

NATURE METHODS (2013)

Article Biotechnology & Applied Microbiology

Information Content-Based Gene Ontology Semantic Similarity Approaches: Toward a Unified Framework Theory

Gaston K. Mazandu et al.

BIOMED RESEARCH INTERNATIONAL (2013)

Article Biochemical Research Methods

Semantic similarity analysis of protein data: assessment with biological features and issues

Pietro H. Guzzi et al.

BRIEFINGS IN BIOINFORMATICS (2012)

Article Mathematical & Computational Biology

Disjunctive shared information between ontology concepts: application to Gene Ontology

Francisco M. Couto et al.

JOURNAL OF BIOMEDICAL SEMANTICS (2011)

Article Mathematical & Computational Biology

Semantic similarity based feature extraction from microarray expression data

Young-Rae Cho et al.

INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS (2009)

Review Biochemical Research Methods

Semantic Similarity in Biomedical Ontologies

Catia Pesquita et al.

PLOS COMPUTATIONAL BIOLOGY (2009)

Article Biochemical Research Methods

Gene Ontology term overlap as a measure of gene functional similarity

Meeta Mistry et al.

BMC BIOINFORMATICS (2008)

Article Biochemical Research Methods

Metrics for GO based protein semantic similarity: a systematic evaluation

Catia Pesquita et al.

BMC BIOINFORMATICS (2008)

Article Biochemical Research Methods

A new method to measure the semantic similarity of GO terms

James Z. Wang et al.

BIOINFORMATICS (2007)

Article Computer Science, Interdisciplinary Applications

Co-clustering and visualization of gene expression data and gene ontology terms for Saccharomyces cerevisiae using self-organizing maps

Markus Brameier et al.

JOURNAL OF BIOMEDICAL INFORMATICS (2007)

Article Multidisciplinary Sciences

Clustering by passing messages between data points

Brendan J. Frey et al.

SCIENCE (2007)

Article Biochemical Research Methods

A new measure for functional similarity of gene products based on Gene Ontology

Andreas Schlicker et al.

BMC BIOINFORMATICS (2006)

Article Biochemistry & Molecular Biology

Prediction of yeast protein-protein interaction network: insights from the Gene Ontology and annotations

Xiaomei Wu et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Biochemical Research Methods

Correlation between gene expression and GO semantic similarity

JL Sevilla et al.

IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS (2005)

Article Biochemistry & Molecular Biology

A human protein-protein interaction network:: A resource for annotating the proteome

U Stelzl et al.

Article Biochemistry & Molecular Biology

UniProt: the Universal Protein knowledgebase

R Apweiler et al.

NUCLEIC ACIDS RESEARCH (2004)

Article Biochemistry & Molecular Biology

Dynalign: An algorithm for finding the secondary structure common to two RNA sequences

DH Mathews et al.

JOURNAL OF MOLECULAR BIOLOGY (2002)