4.7 Article

RNA-Seq reveals MicroRNA expression signature and genetic polymorphism associated with growth and muscle quality traits in rainbow trout

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biotechnology & Applied Microbiology

Characterization of an extensive rainbow trout miRNA transcriptome by next generation sequencing

Amelie Juanchich et al.

BMC GENOMICS (2016)

Article Multidisciplinary Sciences

Genome-Wide Discovery of Long Non-Coding RNAs in Rainbow Trout

Rafet Al-Tobasei et al.

PLOS ONE (2016)

Article Biochemistry & Molecular Biology

Differences in growth, fillet quality, and fatty acid metabolism-related gene expression between juvenile male and female rainbow trout

Meghan L. Manor et al.

FISH PHYSIOLOGY AND BIOCHEMISTRY (2015)

Article Biochemistry & Molecular Biology

Myomaker, Regulated by MYOD, MYOG and miR-140-3p, Promotes Chicken Myoblast Fusion

Wen Luo et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2015)

Article Biochemistry & Molecular Biology

sRNAtoolbox: an integrated collection of small RNA research tools

Antonio Rueda et al.

NUCLEIC ACIDS RESEARCH (2015)

Article Biochemistry & Molecular Biology

PU.1 promotes miR-191 to inhibit adipogenesis in 3T3-L1 preadipocytes

Shengyue Ji et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2014)

Article Medicine, Research & Experimental

miR-143: A Novel Regulator of MyoD Expression in Fast and Slow Muscles of Siniperca chuatsi

L. Chen et al.

CURRENT MOLECULAR MEDICINE (2014)

Article Multidisciplinary Sciences

The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates

Camille Berthelot et al.

NATURE COMMUNICATIONS (2014)

Article Biochemical Research Methods

STAR: ultrafast universal RNA-seq aligner

Alexander Dobin et al.

BIOINFORMATICS (2013)

Review Endocrinology & Metabolism

MicroRNA in myogenesis and muscle atrophy

Xiaonan H. Wang

CURRENT OPINION IN CLINICAL NUTRITION AND METABOLIC CARE (2013)

Article Biology

miR-203b: a novel regulator of MyoD expression in tilapia skeletal muscle

Biao Yan et al.

JOURNAL OF EXPERIMENTAL BIOLOGY (2013)

Article Multidisciplinary Sciences

RNA-Seq Identifies SNP Markers for Growth Traits in Rainbow Trout

Mohamed Salem et al.

PLOS ONE (2012)

Article Multidisciplinary Sciences

Lysine methyltransferase G9a methylates the transcription factor MyoD and regulates skeletal muscle differentiation

Belinda Mei Tze Ling et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Biotechnology & Applied Microbiology

Transcriptional regulation of co-expressed microRNA target genes

Ying Wang et al.

GENOMICS (2011)

Article Biochemistry & Molecular Biology

MicroRNA Identity and Abundance in Developing Swine Adipose Tissue as Determined by Solexa Sequencing

Guoxi Li et al.

JOURNAL OF CELLULAR BIOCHEMISTRY (2011)

Article Biochemistry & Molecular Biology

miR-130 Suppresses Adipogenesis by Inhibiting Peroxisome Proliferator-Activated Receptor γ Expression

Eun Kyung Lee et al.

MOLECULAR AND CELLULAR BIOLOGY (2011)

Article Biochemical Research Methods

Cytoscape Web: an interactive web-based network browser

Christian T. Lopes et al.

BIOINFORMATICS (2010)

Article Biochemistry & Molecular Biology

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

Aaron McKenna et al.

GENOME RESEARCH (2010)

Article Biochemistry & Molecular Biology

Novel intronic microRNA represses zebrafish myf5 promoter activity through silencing dickkopf-3 gene

Ren-Jun Hsu et al.

NUCLEIC ACIDS RESEARCH (2010)

Review Oncology

Genetic variation in microRNA networks: the implications for cancer research

Brid M. Ryan et al.

NATURE REVIEWS CANCER (2010)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Article Biochemical Research Methods

Effects of normalization on quantitative traits in association test

Liang Goh et al.

BMC BIOINFORMATICS (2009)

Article Biochemical Research Methods

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

Da Wei Huang et al.

NATURE PROTOCOLS (2009)

Editorial Material Biochemistry & Molecular Biology

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

Da Wei Huang et al.

NUCLEIC ACIDS RESEARCH (2009)

Article Biochemistry & Molecular Biology

The cell growth suppressor, mir-126, targets IRS-1

Jin Zhang et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2008)

Article Biochemical Research Methods

Analyzing real-time PCR data by the comparative C-T method

Thomas D. Schmittgen et al.

NATURE PROTOCOLS (2008)

Article Biochemistry & Molecular Biology

miR-16 family induces cell cycle arrest by regulating multiple cell cycle genes

Qin Liu et al.

NUCLEIC ACIDS RESEARCH (2008)

Review Genetics & Heredity

MicroRNA target site polymorphisms and human disease

Praveen Sethupathy et al.

TRENDS IN GENETICS (2008)

Article Genetics & Heredity

PLINK: A tool set for whole-genome association and population-based linkage analyses

Shaun Purcell et al.

AMERICAN JOURNAL OF HUMAN GENETICS (2007)

Review Cell Biology

MicroRNAs and their regulatory roles in animals and plants

Baohong Zhang et al.

JOURNAL OF CELLULAR PHYSIOLOGY (2007)

Article Genetics & Heredity

Zebrafish miR-214 modulates Hedgehog signaling to specify muscle cell fate

Alex S. Flynt et al.

NATURE GENETICS (2007)

Article Multidisciplinary Sciences

MicroRNAs direct rapid deadenylation of mRNA

LG Wu et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Cell Biology

Wnt/β-catenin signaling activates growth-control genes during overload-induced skeletal muscle hypertrophy

DD Armstrong et al.

AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY (2005)

Article Biochemistry & Molecular Biology

Regulation by let-7 and lin-4 miRNAs results in target mRNA degradation

S Bagga et al.

Article Genetics & Heredity

Combinatorial microRNA target predictions

A Krek et al.

NATURE GENETICS (2005)

Article Biochemistry & Molecular Biology

Identification of patterns in biological sequences at the ALGGEN server:: PROMO and MALGEN

D Farré et al.

NUCLEIC ACIDS RESEARCH (2003)

Article Biochemical Research Methods

PROMO:: detection of known transcription regulatory elements using species-tailored searches

X Messeguer et al.

BIOINFORMATICS (2002)