4.7 Article

ATAC-seq on biobanked specimens defines a unique chromatin accessibility structure in naive SLE B cells

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Genome-wide CIITA-binding profile identifies sequence preferences that dictate function versus recruitment

Christopher D. Scharer et al.

NUCLEIC ACIDS RESEARCH (2015)

Article Multidisciplinary Sciences

Genetic and epigenetic fine mapping of causal autoimmune disease variants

Kyle Kai-How Farh et al.

NATURE (2015)

Article Biochemistry & Molecular Biology

Epigenomic elements enriched in the promoters of autoimmunity susceptibility genes

Mikhail G. Dozmorov et al.

EPIGENETICS (2014)

Article Multidisciplinary Sciences

Chromatin state dynamics during blood formation

David Lara-Astiaso et al.

SCIENCE (2014)

Article Biochemistry & Molecular Biology

Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes

Warren A. Whyte et al.

Editorial Material Medicine, Research & Experimental

Autoimmunity risk alleles: hotspots in B cell regulatory signaling pathways

John C. Cambier

JOURNAL OF CLINICAL INVESTIGATION (2013)

Article Biochemistry & Molecular Biology

Factorbook.org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium

Jie Wang et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Biochemical Research Methods

Software for Computing and Annotating Genomic Ranges

Michael Lawrence et al.

PLOS COMPUTATIONAL BIOLOGY (2013)

Review Immunology

Specificity through cooperation: BATF-IRF interactions control immune-regulatory networks

Theresa L. Murphy et al.

NATURE REVIEWS IMMUNOLOGY (2013)

Article Biochemistry & Molecular Biology

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

Stephen G. Landt et al.

GENOME RESEARCH (2012)

Article Multidisciplinary Sciences

Architecture of the human regulatory network derived from ENCODE data

Mark B. Gerstein et al.

NATURE (2012)

Article Genetics & Heredity

Controls of Nucleosome Positioning in the Human Genome

Daniel J. Gaffney et al.

PLOS GENETICS (2012)

Article Biochemical Research Methods

FIMO: scanning for occurrences of a given motif

Charles E. Grant et al.

BIOINFORMATICS (2011)

Article Biochemical Research Methods

Abnormalities of B cell subsets in patients with systemic lupus erythematosus

Thomas Doerner et al.

JOURNAL OF IMMUNOLOGICAL METHODS (2011)

Article Biochemical Research Methods

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson et al.

BIOINFORMATICS (2010)

Article Biochemistry & Molecular Biology

Changes in the pattern of DNA methylation associate with twin discordance in systemic lupus erythematosus

Biola M. Javierre et al.

GENOME RESEARCH (2010)

Article Immunology

Batf coordinates multiple aspects of B and T cell function required for normal antibody responses

Briana C. Betz et al.

JOURNAL OF EXPERIMENTAL MEDICINE (2010)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Article Biochemical Research Methods

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

Da Wei Huang et al.

NATURE PROTOCOLS (2009)

Editorial Material Biochemistry & Molecular Biology

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

Da Wei Huang et al.

NUCLEIC ACIDS RESEARCH (2009)

Article Biotechnology & Applied Microbiology

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Ben Langmead et al.

GENOME BIOLOGY (2009)

Article Medicine, Research & Experimental

Germinal center exclusion of autoreactive B cells is defective in human systemic lupus erythematosus

A Cappione et al.

JOURNAL OF CLINICAL INVESTIGATION (2005)

Article Biochemistry & Molecular Biology

JASPAR: an open-access database for eukaryotic transcription factor binding profiles

A Sandelin et al.

NUCLEIC ACIDS RESEARCH (2004)