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Charles C. Davis et al.
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Peter A. Hochuli et al.
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Stephen A. Smith et al.
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Kevin M. Kocot et al.
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Ancestral polyploidy in seed plants and angiosperms
Yuannian Jiao et al.
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Full-length transcriptome assembly from RNA-Seq data without a reference genome
Manfred G. Grabherr et al.
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Ernest K. Lee et al.
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Charles D. Bell et al.
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Jill M. Duarte et al.
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Cedric Finet et al.
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SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building
Manolo Gouy et al.
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Else Marie Friis et al.
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Stephen A. Smith et al.
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Angiosperm phylogeny inferred from sequences of four mitochondrial genes
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David L. Dilcher et al.
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Peter K. Endress et al.
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Douglas E. Soltis et al.
AMERICAN JOURNAL OF BOTANY (2009)
THE MEANING OF DARWIN'S ABOMINABLE MYSTERY
William E. Friedman
AMERICAN JOURNAL OF BOTANY (2009)
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutierrez et al.
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HaMStR: Profile hidden markov model based search for orthologs in ESTs
Ingo Ebersberger et al.
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An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY (2009)
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Liliana A. Davalos et al.
GENOMICS (2008)
AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics
Johan A. A. Nylander et al.
BIOINFORMATICS (2008)
Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns
Robert K. Jansen et al.
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Using plastid genome-scale data to resolve enigmatic relationships among basal angiosperms
Michael J. Moore et al.
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In defence of a conifer taxonomy which recognises evolution
Aljos Farjon
TAXON (2007)
Towards a phylogenetic nomenclature of Tracheophyta
Philip D. Cantino et al.
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RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
Alexandros Stamatakis
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Bushes in the tree of life
Antonis Rokas et al.
PLOS BIOLOGY (2006)
Reconstructing the basal angiosperm phylogeny: evaluating information content of mitochondrial genes
Yin-Long Qiu et al.
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Phylogeny of the ants: Diversification in the age of angiosperms
CS Moreau et al.
SCIENCE (2006)
PATRISTIC: a program for calculating patristic distances and graphically comparing the components of genetic change
M Fourment et al.
BMC EVOLUTIONARY BIOLOGY (2006)
Phylogenomics and the reconstruction of the tree of life
F Delsuc et al.
NATURE REVIEWS GENETICS (2005)
ProtTest: selection of best-fit models of protein evolution
F Abascal et al.
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Ferns diversified in the shadow of angiosperms
H Schneider et al.
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MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)
Long branch attraction, taxon sampling, and the earliest angiosperms: Amborella or monocots? - art. no. 35
S Stefanovic et al.
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Phylogenomics of eukaryotes: Impact of missing data on large alignments
H Philippe et al.
MOLECULAR BIOLOGY AND EVOLUTION (2004)
Genome-scale approaches to resolving incongruence in molecular phylogenies
A Rokas et al.
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MrBayes 3: Bayesian phylogenetic inference under mixed models
F Ronquist et al.
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TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets
G Pertea et al.
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r8s: inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock
MJ Sanderson
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CONSEL: for assessing the confidence of phylogenetic tree selection
H Shimodaira et al.
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Did dinosaurs invent flowers? Dinosaur-angiosperm coevolution revisited
PM Barrett et al.
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Fossil evidence of water lilies (Nymphaeales) in the Early Cretaceous
EM Friis et al.
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