4.3 Article

Chd1 co-localizes with early transcription elongation factors independently of H3K36 methylation and releases stalled RNA polymerase II at introns

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Multidisciplinary Sciences

Widespread Misinterpretable ChIP-seq Bias in Yeast

Daechan Park et al.

PLOS ONE (2013)

Article Genetics & Heredity

ISWI and CHD Chromatin Remodelers Bind Promoters but Act in Gene Bodies

Gabriel E. Zentner et al.

PLOS GENETICS (2013)

Article Biochemistry & Molecular Biology

Standardized collection of MNase-seq experiments enables unbiased dataset comparisons

Jason M. Rizzo et al.

BMC MOLECULAR BIOLOGY (2012)

Article Biochemistry & Molecular Biology

Genome-wide Nucleosome Specificity and Directionality of Chromatin Remodelers

Kuangyu Yen et al.

Article Biochemistry & Molecular Biology

Hrp3 controls nucleosome positioning to suppress non-coding transcription in eu- and heterochromatin

Young Sam Shim et al.

EMBO JOURNAL (2012)

Article Biochemistry & Molecular Biology

Chd1 chromatin remodelers maintain nucleosome organization and repress cryptic transcription

Bianca P. Hennig et al.

EMBO REPORTS (2012)

Article Cell Biology

Codependency of H2B monoubiquitination and nucleosome reassembly on Chd1

Jung-Shin Lee et al.

GENES & DEVELOPMENT (2012)

Article Biochemistry & Molecular Biology

Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange

Michaela Smolle et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2012)

Review Cell Biology

Nucleosome positioning: bringing order to the eukaryotic genome

Vishwanath R. Iyer

TRENDS IN CELL BIOLOGY (2012)

Article Genetics & Heredity

A Key Role for Chd1 in Histone H3 Dynamics at the 3′ Ends of Long Genes in Yeast

Marta Radman-Livaja et al.

PLOS GENETICS (2012)

Article Biochemistry & Molecular Biology

Tup1 stabilizes promoter nucleosome positioning and occupancy at transcriptionally plastic genes

Jason M. Rizzo et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Multidisciplinary Sciences

A Role for Snf2-Related Nucleosome-Spacing Enzymes in Genome-Wide Nucleosome Organization

Triantaffyllos Gkikopoulos et al.

SCIENCE (2011)

Article Multidisciplinary Sciences

A Packing Mechanism for Nucleosome Organization Reconstituted Across a Eukaryotic Genome

Zhenhai Zhang et al.

SCIENCE (2011)

Article Biochemistry & Molecular Biology

Splicing-Dependent RNA Polymerase Pausing in Yeast

Ross D. Alexander et al.

MOLECULAR CELL (2010)

Article Biochemistry & Molecular Biology

Global Analysis of Nascent RNA Reveals Transcriptional Pausing in Terminal Exons

Fernando Carrillo Oesterreich et al.

MOLECULAR CELL (2010)

Article Biotechnology & Applied Microbiology

Widespread remodeling of mid-coding sequence nucleosomes by Isw1

Itay Tirosh et al.

GENOME BIOLOGY (2010)

Article Biochemical Research Methods

Fast and accurate short read alignment with Burrows-Wheeler transform

Heng Li et al.

BIOINFORMATICS (2009)

Review Biochemistry & Molecular Biology

Predictive chromatin signatures in the mammalian genome

Gary C. Hon et al.

HUMAN MOLECULAR GENETICS (2009)

Article Multidisciplinary Sciences

The DNA-encoded nucleosome organization of a eukaryotic genome

Noam Kaplan et al.

NATURE (2009)

Article Biotechnology & Applied Microbiology

A compiled and systematic reference map of nucleosome positions across the Saccharomyces cerevisiae genome

Cizhong Jiang et al.

GENOME BIOLOGY (2009)

Article Biochemistry & Molecular Biology

Stress-dependent dynamics of global chromatin remodeling in yeast: Dual role for SWI/SNF in the heat shock stress response

Sushma Shivaswamy et al.

MOLECULAR AND CELLULAR BIOLOGY (2008)

Article Genetics & Heredity

A high- resolution atlas of nucleosome occupancy in yeast

William Lee et al.

NATURE GENETICS (2007)

Article Biochemistry & Molecular Biology

Molecular implications of evolutionary differences in CHD double chromodomains

John F. Flanagan et al.

JOURNAL OF MOLECULAR BIOLOGY (2007)

Article Multidisciplinary Sciences

A genomic code for nucleosome positioning

Eran Segal et al.

NATURE (2006)

Article Biochemistry & Molecular Biology

Human but not yeast CHD1 binds directly and selectively to histone H3 methylated at lysine 4 via its tandem chromodomains

RJ Sims et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2005)

Article Multidisciplinary Sciences

Genome-scale identification of nucleosome positions in S-cerevisiae

GC Yuan et al.

SCIENCE (2005)

Article Biochemistry & Molecular Biology

The histone 3 lysine 36 methyltransferase, SET2, is involved in transcriptional elongation

D Schaft et al.

NUCLEIC ACIDS RESEARCH (2003)