期刊
GENOME BIOLOGY
卷 16, 期 -, 页码 -出版社
BMC
DOI: 10.1186/s13059-015-0582-8
关键词
-
资金
- Office of Science of the US Department of Energy [DE-AC02-05CH11231]
- Triticeae Coordinated Agricultural Project, US Department of Agriculture/National Institute for Food and Agriculture [2011-68002-30029]
- Kansas Wheat Commission
- Kansas Wheat Alliance
- Bill and Melinda Gates Foundation
- US National Science Foundation
- USAID
- Scottish Government Rural and Environment Science and Analytical Services Division
- BBSRC grant [BB/I00663X/1]
- Bundesministerium fur Bildung und Forschung Plant program [TRITEX 0315954, NUGGET 0315957A]
- US DOE [DE-SC0008700]
- NHGRI Berkeley Training Grant in Genomics
- U.S. Department of Energy (DOE) [DE-SC0008700] Funding Source: U.S. Department of Energy (DOE)
- BBSRC [BB/I00663X/1] Funding Source: UKRI
- Biotechnology and Biological Sciences Research Council [BB/I00663X/1] Funding Source: researchfish
- Direct For Biological Sciences
- Division Of Integrative Organismal Systems [1339389] Funding Source: National Science Foundation
- Div Of Industrial Innovation & Partnersh
- Directorate For Engineering [1338897] Funding Source: National Science Foundation
Polyploid species have long been thought to be recalcitrant to whole-genome assembly. By combining high-throughput sequencing, recent developments in parallel computing, and genetic mapping, we derive, de novo, a sequence assembly representing 9.1 Gbp of the highly repetitive 16 Gbp genome of hexaploid wheat, Triticum aestivum, and assign 7.1 Gb of this assembly to chromosomal locations. The genome representation and accuracy of our assembly is comparable or even exceeds that of a chromosome-by-chromosome shotgun assembly. Our assembly and mapping strategy uses only short read sequencing technology and is applicable to any species where it is possible to construct a mapping population.
作者
我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。
推荐
暂无数据
分享论文
