相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Transcript profiles in cortical cells of maize primary root during ethylene-induced lysigenous aerenchyma formation under aerobic conditions
Hirokazu Takahashi et al.
ANNALS OF BOTANY (2015)
An Integrated Approach to Reconstructing Genome-Scale Transcriptional Regulatory Networks
Saheed Imam et al.
PLOS COMPUTATIONAL BIOLOGY (2015)
Analysis of global gene expression profile of rice in response to methylglyoxal indicates its possible role as a stress signal molecule
Charanpreet Kaur et al.
FRONTIERS IN PLANT SCIENCE (2015)
ROS-mediated abiotic stress-induced programmed cell death in plants
Veselin Petrov et al.
FRONTIERS IN PLANT SCIENCE (2015)
Annotation of gene function in citrus using gene expression information and co-expression networks
Darren C. J. Wong et al.
BMC PLANT BIOLOGY (2014)
Overexpression of OsMYB48-1, a Novel MYB-Related Transcription Factor, Enhances Drought and Salinity Tolerance in Rice
Haiyan Xiong et al.
PLOS ONE (2014)
The ABA Receptor PYL8 Promotes Lateral Root Growth by Enhancing MYB77-Dependent Transcription of Auxin-Responsive Genes
Yang Zhao et al.
SCIENCE SIGNALING (2014)
Candidate gene association studies: a comprehensive guide to useful in silico tools
Radhika Patnala et al.
BMC GENETICS (2013)
VTCdb: a gene co-expression database for the crop species Vitis vinifera (grapevine)
Darren C. J. Wong et al.
BMC GENOMICS (2013)
RiceFREND: a platform for retrieving coexpressed gene networks in rice
Yutaka Sato et al.
NUCLEIC ACIDS RESEARCH (2013)
Identification of conserved drought stress responsive gene-network across tissues and developmental stages in rice
Shuchi Smita et al.
BIOINFORMATION (2013)
Genome-wide classification and expression analysis of MYB transcription factor families in rice and Arabidopsis
Amit Katiyar et al.
BMC GENOMICS (2012)
Genomic survey, expression profile and co-expression network analysis of OsWD40 family in rice
Yidan Ouyang et al.
BMC GENOMICS (2012)
Regulation of ATG6/Beclin-1 homologs by abiotic stresses and hormones in rice (Oryza sativa L.)
R. M. Rana et al.
GENETICS AND MOLECULAR RESEARCH (2012)
Control of the Plant Cell Cycle by Developmental and Environmental Cues
Shinichiro Komaki et al.
PLANT AND CELL PHYSIOLOGY (2012)
The Calmodulin-Binding Transcription Factor SIGNAL RESPONSIVE1 is a Novel Regulator of Glucosinolate Metabolism and Herbivory Tolerance in Arabidopsis
K. Laluk et al.
PLANT AND CELL PHYSIOLOGY (2012)
Comparative co-expression analysis in plant biology
Sara Movahedi et al.
PLANT CELL AND ENVIRONMENT (2012)
OsMYB2P-1, an R2R3 MYB Transcription Factor, Is Involved in the Regulation of Phosphate-Starvation Responses and Root Architecture in Rice
Xiaoyan Dai et al.
PLANT PHYSIOLOGY (2012)
Characterization of Genes Involved in Cytokinin Signaling and Metabolism from Rice
Yu-Chang Tsai et al.
PLANT PHYSIOLOGY (2012)
Genome-Wide Analysis of the Complex Transcriptional Networks of Rice Developing Seeds
Liang-Jiao Xue et al.
PLOS ONE (2012)
The R2R3-MYB Transcription Factor Gene Family in Maize
Hai Du et al.
PLOS ONE (2012)
Identification of Gene Modules Associated with Drought Response in Rice by Network-Based Analysis
Lida Zhang et al.
PLOS ONE (2012)
Chapter 5: Network Biology Approach to Complex Diseases
Dong-Yeon Cho et al.
PLOS COMPUTATIONAL BIOLOGY (2012)
Effects of abiotic stress on plants: a systems biology perspective
Grant R. Cramer et al.
BMC PLANT BIOLOGY (2011)
Two-Component Systems and Their Co-Option for Eukaryotic Signal Transduction
G. Eric Schaller et al.
CURRENT BIOLOGY (2011)
Hormone balance and abiotic stress tolerance in crop plants
Zvi Peleg et al.
CURRENT OPINION IN PLANT BIOLOGY (2011)
Expression of a wheat MYB gene in transgenic tobacco enhances resistance to Ralstonia solanacearum, and to drought and salt stresses
Hongxia Liu et al.
FUNCTIONAL & INTEGRATIVE GENOMICS (2011)
Recent advances in the transcriptional regulation of the flavonoid biosynthetic pathway
Imene Hichri et al.
JOURNAL OF EXPERIMENTAL BOTANY (2011)
Functions and Application of the AP2/ERF Transcription Factor Family in Crop Improvement
Zhao-Shi Xu et al.
JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2011)
g:Profiler-a web server for functional interpretation of gene lists (2011 update)
Jueri Reimand et al.
NUCLEIC ACIDS RESEARCH (2011)
Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy
Ivica Letunic et al.
NUCLEIC ACIDS RESEARCH (2011)
The MYB96 Transcription Factor Regulates Cuticular Wax Biosynthesis under Drought Conditions in Arabidopsis
Pil Joon Seo et al.
PLANT CELL (2011)
TaMYB13 is a transcriptional activator of fructosyltransferase genes involved in β-2,6-linked fructan synthesis in wheat
Gang-Ping Xue et al.
PLANT JOURNAL (2011)
Rice ABI5-Like1 Regulates Abscisic Acid and Auxin Responses by Affecting the Expression of ABRE-Containing Genes
Xi Yang et al.
PLANT PHYSIOLOGY (2011)
Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress
Kil-Young Yun et al.
BMC PLANT BIOLOGY (2010)
Regulation of Cell Proliferation in the Stomatal Lineage by the Arabidopsis MYB FOUR LIPS via Direct Targeting of Core Cell Cycle Genes
Zidian Xie et al.
PLANT CELL (2010)
Supra-optimal expression of the cold-regulated OsMyb4 transcription factor in transgenic rice changes the complexity of transcriptional network with major effects on stress tolerance and panicle development
Myoung-Ryoul Park et al.
PLANT CELL AND ENVIRONMENT (2010)
A gene family encoding RING finger proteins in rice: their expansion, expression diversity, and co-expressed genes
Sung Don Lim et al.
PLANT MOLECULAR BIOLOGY (2010)
A Novel MYBS3-Dependent Pathway Confers Cold Tolerance in Rice
Chin-Fen Su et al.
PLANT PHYSIOLOGY (2010)
Isolation and functional characterization of a floral tissue-specific R2R3 MYB regulator from tobacco
Sitakanta Pattanaik et al.
PLANTA (2010)
MYB transcription factors in Arabidopsis
Christian Dubos et al.
TRENDS IN PLANT SCIENCE (2010)
Biochemical and molecular characterization of plant MYB transcription factor family
Hai Du et al.
BIOCHEMISTRY-MOSCOW (2009)
Discovery of cis-elements between sorghum and rice using co-expression and evolutionary conservation
Xi Wang et al.
BMC GENOMICS (2009)
Characterization of WRKY co-regulatory networks in rice and Arabidopsis
Stefano Berri et al.
BMC PLANT BIOLOGY (2009)
A new role for plant R2R3-MYB transcription factors in cell cycle regulation
Eleonora Cominelli et al.
CELL RESEARCH (2009)
The Plastidic Bile Acid Transporter 5 Is Required for the Biosynthesis of Methionine-Derived Glucosinolates in Arabidopsis thaliana
Tamara Gigolashvili et al.
PLANT CELL (2009)
A Recommendation for Naming Transcription Factor Proteins in the Grasses
John Gray et al.
PLANT PHYSIOLOGY (2009)
Transcriptional Regulatory Networks in Response to Abiotic Stresses in Arabidopsis and Grasses
Kazuo Nakashima et al.
PLANT PHYSIOLOGY (2009)
Enhanced Tolerance to Chilling Stress in OsMYB3R-2 Transgenic Rice Is Mediated by Alteration in Cell Cycle and Ectopic Expression of Stress Genes
Qibin Ma et al.
PLANT PHYSIOLOGY (2009)
Gene and Metabolite Regulatory Network Analysis of Early Developing Fruit Tissues Highlights New Candidate Genes for the Control of Tomato Fruit Composition and Development
Fabien Mounet et al.
PLANT PHYSIOLOGY (2009)
Unraveling Transcriptional Control in Arabidopsis Using cis-Regulatory Elements and Coexpression Networks
Klaas Vandepoele et al.
PLANT PHYSIOLOGY (2009)
Rewiring the specificity of two-component signal transduction systems
Jeffrey M. Skerker et al.
CELL (2008)
Cell-PLoc: a package of Web servers for predicting subcellular localization of proteins in various organisms
Kuo-Chen Chou et al.
NATURE PROTOCOLS (2008)
Graph clustering via a discrete uncoupling process
Stijn Van Dongen
SIAM JOURNAL ON MATRIX ANALYSIS AND APPLICATIONS (2008)
Plant systems biology comes of age
Joshua S. Yuan et al.
TRENDS IN PLANT SCIENCE (2008)
The Promoter Signatures in Rice LEA Genes Can Be Used to Build a Co-expressing LEA Gene Network
Stuart Meier et al.
RICE (2008)
A Systems Biology Approach Identifies a R2R3 MYB Gene Subfamily with Distinct and Overlapping Functions in Regulation of Aliphatic Glucosinolates
Ida Elken Sonderby et al.
PLOS ONE (2007)
Heat tolerance in plants: An overview
A. Wahid et al.
ENVIRONMENTAL AND EXPERIMENTAL BOTANY (2007)
WoLF PSORT: protein localization predictor
Paul Horton et al.
NUCLEIC ACIDS RESEARCH (2007)
Understanding abiotic stress tolerance mechanisms: Recent studies on stress response in rice
Ji-Ping Gao et al.
JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2007)
The two-component signal system in rice (Oryza sativa L.):: A genome-wide study of cytokinin signal perception and transduction
Liming Du et al.
GENOMICS (2007)
Overexpression of an R1R2R3 MYB gene, OsMYB3R-2, increases tolerance to freezing, drought, and salt stress in transgenic Arabidopsis
Xiaoyan Dai et al.
PLANT PHYSIOLOGY (2007)
Arabidopsis MYB26/MALE STERILE35 regulates secondary thickening in the endothecium and is essential for anther dehiscence
Caiyun Yang et al.
PLANT CELL (2007)
Gene networks involved in drought stress response and tolerance
Kazuo Shinozaki et al.
JOURNAL OF EXPERIMENTAL BOTANY (2007)
Approaches for extracting practical information from gene co-expression networks in plant biology
Koh Aoki et al.
PLANT AND CELL PHYSIOLOGY (2007)
Hubs in biological interaction networks exhibit low changes in expression in experimental asthma
Xin Lu et al.
MOLECULAR SYSTEMS BIOLOGY (2007)
Unraveling transcription regulatory networks by protein-DNA and protein-protein interaction mapping
Albertha J. M. Walhout
GENOME RESEARCH (2006)
Locating mammalian transcription factor binding sites: A survey of computational and experimental techniques
Laura Elnitski et al.
GENOME RESEARCH (2006)
Microarray analysis after RNA amplification can detect pronounced differences in gene expression using limma
Ilhem Diboun et al.
BMC GENOMICS (2006)
Transcription factor families in Arabidopsis:: major progress and outstanding issues for future research -: Commentary
Li-Jia Qu et al.
CURRENT OPINION IN PLANT BIOLOGY (2006)
Prediction of protein subcellular localization
Chin-Sheng Yu et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2006)
MEME: discovering and analyzing DNA and protein sequence motifs
Timothy L. Bailey et al.
NUCLEIC ACIDS RESEARCH (2006)
Disordered domains and high surface charge confer hubs with the ability to interact with multiple proteins in interaction networks
A Patil et al.
FEBS LETTERS (2006)
Comparative promoter region analysis powered by CORG -: art. no. 24
C Dieterich et al.
BMC GENOMICS (2005)
Network biology:: Understanding the cell's functional organization
AL Barabási et al.
NATURE REVIEWS GENETICS (2004)
Transcriptional regulatory code of a eukaryotic genome
CT Harbison et al.
NATURE (2004)
Molecular genetic perspectives on cross-talk and specificity in abiotic stress signalling in plants
V Chinnusamy et al.
JOURNAL OF EXPERIMENTAL BOTANY (2004)
Bioconductor: open software development for computational biology and bioinformatics
RC Gentleman et al.
GENOME BIOLOGY (2004)
Combining phylogenetic data with co-regulated genes to identify regulatory motifs
T Wang et al.
BIOINFORMATICS (2003)
The novel MYB protein EARLY-PHYTOCHROME-RESPONSIVE1 is a component of a slave circadian oscillator in Arabidopsis
N Kuno et al.
PLANT CELL (2003)
Cell-fate specification in the epidermis: a common patterning mechanism in the root and shoot
J Schiefelbein
CURRENT OPINION IN PLANT BIOLOGY (2003)
A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
BM Bolstad et al.
BIOINFORMATICS (2003)
Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)
Three novel MYB proteins with one DNA binding repeat mediate sugar and hormone regulation of α-amylase gene expression
CA Lu et al.
PLANT CELL (2002)
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences
M Lescot et al.
NUCLEIC ACIDS RESEARCH (2002)
Two-component circuitry in Arabidopsis cytokinin signal transduction
I Hwang et al.
NATURE (2001)
Genes controlling expression of defense responses in Arabidopsis -: 2001 status
J Glazebrook
CURRENT OPINION IN PLANT BIOLOGY (2001)
Topology of evolving networks:: Local events and universality
R Albert et al.
PHYSICAL REVIEW LETTERS (2000)
分享论文
