相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Implementing a Class of Permutation Tests: ThecoinPackage
Torsten Hothorn et al.
Journal of Statistical Software (2015)
Does random tree puzzle produce Yule-Harding trees in the many-taxon limit?
Sha Zhu et al.
MATHEMATICAL BIOSCIENCES (2013)
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
Fredrik Ronquist et al.
SYSTEMATIC BIOLOGY (2012)
Random Tree-Puzzle Leads to the Yule-Harding Distribution
Le Sy Vinh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
Consequences of Different Null Models on the Tree Shape Bias of Supertree Methods
Anne Kupczok
SYSTEMATIC BIOLOGY (2011)
Deep Genomic-Scale Analyses of the Metazoa Reject Coelomata: Evidence from Single- and Multigene Families Analyzed Under a Supertree and Supermatrix Paradigm
Therese A. Holton et al.
GENOME BIOLOGY AND EVOLUTION (2010)
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
Stephane Guindon et al.
SYSTEMATIC BIOLOGY (2010)
An improved general amino acid replacement matrix
Si Quang Le et al.
MOLECULAR BIOLOGY AND EVOLUTION (2008)
Which random processes describe the tree of life?: A large-scale study of phylogenetic tree imbalance
Michael G. B. Blum et al.
SYSTEMATIC BIOLOGY (2006)
Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified
TM Keane et al.
BMC EVOLUTIONARY BIOLOGY (2006)
apTreeshape:: statistical analysis of phylogenetic tree shape
N Bortolussi et al.
BIOINFORMATICS (2006)
The shape of supertrees to come: Tree shape related properties of fourteen supertree methods
M Wilkinson et al.
SYSTEMATIC BIOLOGY (2005)
RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees
A Stamatakis et al.
BIOINFORMATICS (2005)
APE: Analyses of Phylogenetics and Evolution in R language
E Paradis et al.
BIOINFORMATICS (2004)
A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process
N Lartillot et al.
MOLECULAR BIOLOGY AND EVOLUTION (2004)
TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing
HA Schmidt et al.
BIOINFORMATICS (2002)
Stochastic models and descriptive statistics for phylogenetic trees, from Yule to today
DJ Aldous
STATISTICAL SCIENCE (2001)
Distributions of cherries for two models of trees
A McKenzie et al.
MATHEMATICAL BIOSCIENCES (2000)