相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。A Bayesian framework to estimate diversification rates and their variation through time and space
Daniele Silvestro et al.
BMC EVOLUTIONARY BIOLOGY (2011)
ESTIMATING DIVERSIFICATION RATES: HOW USEFUL ARE DIVERGENCE TIMES?
Joel O. Wertheim et al.
EVOLUTION (2011)
DEALING WITH INCOMPLETE TAXON SAMPLING AND DIVERSIFICATION OF A LARGE CLADE OF MUSHROOM-FORMING FUNGI
Martin Ryberg et al.
EVOLUTION (2011)
Testing for Temporal Variation in Diversification Rates When Sampling is Incomplete and Nonrandom
Chad D. Brock et al.
SYSTEMATIC BIOLOGY (2011)
Niche Conservatism Drives Elevational Diversity Patterns in Appalachian Salamanders
Kenneth H. Kozak et al.
AMERICAN NATURALIST (2010)
Adaptive Radiation, Ecological Opportunity, and Evolutionary Determinism
Jonathan B. Losos
AMERICAN NATURALIST (2010)
Phylogenetic Insights on Adaptive Radiation
Richard E. Glor
ANNUAL REVIEW OF ECOLOGY, EVOLUTION, AND SYSTEMATICS, VOL 41 (2010)
EXTINCTION RATES SHOULD NOT BE ESTIMATED FROM MOLECULAR PHYLOGENIES
Daniel L. Rabosky
EVOLUTION (2010)
ECOLOGICAL OPPORTUNITY AND THE RATE OF MORPHOLOGICAL EVOLUTION IN THE DIVERSIFICATION OF GREATER ANTILLEAN ANOLES
D. Luke Mahler et al.
EVOLUTION (2010)
LARGE-SCALE PATTERNS OF DIVERSIFICATION IN THE WIDESPREAD LEGUME GENUS SENNA AND THE EVOLUTIONARY ROLE OF EXTRAFLORAL NECTARIES
Brigitte Marazzi et al.
EVOLUTION (2010)
Ecological opportunity and the origin of adaptive radiations
J. B. Yoder et al.
JOURNAL OF EVOLUTIONARY BIOLOGY (2010)
Equilibrium speciation dynamics in a model adaptive radiation of island lizards
Daniel L. Rabosky et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Unparalleled rates of species diversification in Europe
Luis M. Valente et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2010)
Quantitative Traits and Diversification
Richard G. FitzJohn
SYSTEMATIC BIOLOGY (2010)
Sampling Trees from Evolutionary Models
Klaas Hartmann et al.
SYSTEMATIC BIOLOGY (2010)
Slowdowns in Diversification Rates from Real Phylogenies May Not be Real
Natalie Cusimano et al.
SYSTEMATIC BIOLOGY (2010)
Diversity dynamics: molecular phylogenies need the fossil record
Tiago B. Quental et al.
TRENDS IN ECOLOGY & EVOLUTION (2010)
PHYLOGENY OF THE TRIBE INDIGOFEREAE (LEGUMINOSAE-PAPILIONOIDEAE): GEOGRAPHICALLY STRUCTURED MORE IN SUCCULENT-RICH AND TEMPERATE SETTINGS THAN IN GRASS-RICH ENVIRONMENTS
Brian D. Schrire et al.
AMERICAN JOURNAL OF BOTANY (2009)
THE EVOLUTIONARY ORIGIN OF A SECOND RADIATION OF ANNUAL CASTILLEJA (OROBANCHACEAE) SPECIES IN SOUTH AMERICA: THE ROLE OF LONG DISTANCE DISPERSAL AND ALLOPOLYPLOIDY
David C. Tank et al.
AMERICAN JOURNAL OF BOTANY (2009)
Climate, Niche Evolution, and Diversification of the Bird-Cage Evening Primroses (Oenothera, Sections Anogra and Kleinia)
Margaret E. K. Evans et al.
AMERICAN NATURALIST (2009)
Ecological Limits on Clade Diversification in Higher Taxa
Daniel L. Rabosky
AMERICAN NATURALIST (2009)
Influence of Andean uplift on climate and paleoaltimetry estimates
Todd A. Ehlers et al.
EARTH AND PLANETARY SCIENCE LETTERS (2009)
Ecological limits and diversification rate: alternative paradigms to explain the variation in species richness among clades and regions
Daniel L. Rabosky
ECOLOGY LETTERS (2009)
EXPLOSIVE RADIATION OR CRYPTIC MASS EXTINCTION? INTERPRETING SIGNATURES IN MOLECULAR PHYLOGENIES
Michael D. Crisp et al.
EVOLUTION (2009)
Prospects and challenges for parametric models in historical biogeographical inference
Richard H. Ree et al.
JOURNAL OF BIOGEOGRAPHY (2009)
On incomplete sampling under birth-death models and connections to the sampling-based coalescent
Tanja Stadler
JOURNAL OF THEORETICAL BIOLOGY (2009)
Molecular phylogeny of Scorzoneroides (Asteraceae): Evolution of heterocarpy and annual habit in unpredictable environments
G. Cruz-Mazo et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2009)
Morphological Diversity and the Roles of Contingency, Chance and Determinism in African Cichlid Radiations
Kyle A. Young et al.
PLOS ONE (2009)
Adaptive Radiation in Mediterranean Cistus (Cistaceae)
Beatriz Guzman et al.
PLOS ONE (2009)
A Bayesian approach for evaluating the impact of historical events on rates of diversification
Brian R. Moore et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Recent assembly of the Cerrado, a neotropical plant diversity hotspot, by in situ evolution of adaptations to fire
Marcelo F. Simon et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates
Michael E. Alfaro et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Problems detecting density-dependent diversification on phylogenies: reply to Bokma
Daniel L. Rabosky et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2009)
Problems detecting density-dependent diversification on phylogenies
Folmer Bokma
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2009)
Life history influences rates of climatic niche evolution in flowering plants
Stephen A. Smith et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2009)
Adaptive Radiation: Contrasting Theory with Data
Sergey Gavrilets et al.
SCIENCE (2009)
Evidence for Ecological Speciation and Its Alternative
Dolph Schluter
SCIENCE (2009)
Heritability of Extinction Rates Links Diversification Patterns in Molecular Phylogenies and Fossils
Daniel L. Rabosky
SYSTEMATIC BIOLOGY (2009)
Adaptive radiation, nonadaptive radiation, ecological speciation and nonecological speciation
Rebecca J. Rundell et al.
TRENDS IN ECOLOGY & EVOLUTION (2009)
Reconstructing ancestral ranges in historical biogeography: properties and prospects
Kristin S. Lamm et al.
JOURNAL OF SYSTEMATICS AND EVOLUTION (2009)
Bayesian Phylogeography Finds Its Roots
Philippe Lemey et al.
PLOS COMPUTATIONAL BIOLOGY (2009)
From annuals to perennials: Phylogeny of subtribe Castillernae (Orobanchaceae)
David C. Tank et al.
AMERICAN JOURNAL OF BOTANY (2008)
Phylogeny, biogeography, and rates of diversification of New World Astragalus (Leguminosae) with an emphasis on South American radiations
Rosa A. Scherson et al.
AMERICAN JOURNAL OF BOTANY (2008)
The Ecological Dynamics of Clade Diversification and Community Assembly
Mark A. McPeek
AMERICAN NATURALIST (2008)
Bayesian estimation of speciation and extinction probabilities from (in)complete phylogenies
Folmer Bokma
EVOLUTION (2008)
Explosive evolutionary radiations: Decreasing speciation or increasing extinction through time?
Daniel L. Rabosky et al.
EVOLUTION (2008)
DETECTION OF PUNCTUATED EQUILIBRIUM BY BAYESIAN ESTIMATION OF SPECIATION AND EXTINCTION RATES, ANCESTRAL CHARACTER STATES, AND RATES OF ANAGENETIC AND CLADOGENETIC EVOLUTION ON A MOLECULAR PHYLOGENY
Folmer Bokma
EVOLUTION (2008)
Inferring dispersal:: a Bayesian approach to phylogeny-based island biogeography, with special reference to the Canary Islands
Isabel Sanmartin et al.
JOURNAL OF BIOGEOGRAPHY (2008)
The conditioned reconstructed process
Tanja Gernhard
JOURNAL OF THEORETICAL BIOLOGY (2008)
Diversification of Lupinus (Leguminosae) in the western New World:: Derived evolution of perennial life history and colonization of montane habitats
Christopher S. Drummond
MOLECULAR PHYLOGENETICS AND EVOLUTION (2008)
Plant species radiations: where, when, why?
Hans Peter Linder
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2008)
Dynamics of origination and extinction in the marine fossil record
John Alroy
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Density-dependent diversification in North American wood warblers
Daniel L. Rabosky et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2008)
Taxon sampling affects inferences of macroevolutionary processes from phylogenetic trees
Tracy A. Heath et al.
SYSTEMATIC BIOLOGY (2008)
The Role of Geography and Ecological Opportunity in the Diversification of Day Geckos (Phelsuma)
Luke J. Harmon et al.
SYSTEMATIC BIOLOGY (2008)
Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis
Richard H. Ree et al.
SYSTEMATIC BIOLOGY (2008)
Phylogenetic analysis of community assembly and structure over space and time
Brent C. Emerson et al.
TRENDS IN ECOLOGY & EVOLUTION (2008)
GEIGER: investigating evolutionary radiations
Luke J. Harmon et al.
BIOINFORMATICS (2008)
Climatic zonation drives latitudinal variation in speciation mechanisms
Kenneth H. Kozak et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2007)
Exceptional among-lineage variation in diversification rates during the radiation of Australia's most diverse vertebrate clade
Daniel L. Rabosky et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2007)
Comparative tests of ectoparasite species richness in seabirds
Joseph Hughes et al.
BMC EVOLUTIONARY BIOLOGY (2007)
Estimating diversification rates from phylogenetic information
Robert E. Ricklefs
TRENDS IN ECOLOGY & EVOLUTION (2007)
The use of 'altitude' in ecological research
Christian Koerner
TRENDS IN ECOLOGY & EVOLUTION (2007)
Estimating a binary character's effect on speciation and extinction
Wayne P. Maddison et al.
SYSTEMATIC BIOLOGY (2007)
Correlates of diversification in the plant clade dipsacales: Geographic movement and evolutionary innovations
Brian R. Moore et al.
AMERICAN NATURALIST (2007)
A phylogenetic perspective on elevational species richness patterns in Middle American treefrogs: Why so few species in lowland tropical rainforests?
Sarah A. Smith et al.
EVOLUTION (2007)
The effect of model choice on phylogenetic inference using mitochondrial sequence data: Lessons from the scorpions
Martin Jones et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2007)
Phylogenetic history underlies elevational biodiversity patterns in tropical salamanders
John J. Wiens et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2007)
Evolution into and out of the Andes:: A Bayesian analysis of historical diversification in Thamnophilus antshrikes
Robb T. Brumfield et al.
EVOLUTION (2007)
How did life become so diverse? The dynamics of diversification according to the fossil record and molecular phylogenetics
Michael J. Benton et al.
PALAEONTOLOGY (2007)
Does niche conservatism promote speciation? A case study in North American salamanders
Kenneth H. Kozak et al.
EVOLUTION (2006)
African cichlid fish: a model system in adaptive radiation research
Ole Seehausen
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2006)
Island radiation on a continental scale: Exceptional rates of plant diversification after uplift of the Andes
Colin Hughes et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Relaxed phylogenetics and dating with confidence
Alexei J. Drummond et al.
PLOS BIOLOGY (2006)
Intercontinental community convergence of ecology and morphology in desert lizards
J Melville et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2006)
Rapid lineage accumulation in a non-adaptive radiation:: phylogenetic analysis of diversification rates in eastern North American woodland salamanders (Plethodontidae: Plethodon)
KH Kozak et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2006)
Incorporating information from length-mutational events into phylogenetic analysis
K Müller
MOLECULAR PHYLOGENETICS AND EVOLUTION (2006)
History and causes of post-Laramide relief in the Rocky Mountain orogenic plateau
ME McMillan et al.
GEOLOGICAL SOCIETY OF AMERICA BULLETIN (2006)
Phylogenetic supermatrix analysis of GenBank sequences from 2228 papilionoid legumes
Michelle M. McMahon et al.
SYSTEMATIC BIOLOGY (2006)
Dynamic patterns of adaptive radiation
S Gavrilets et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
The mid-domain effect: There's a baby in the bathwater
RK Colwell et al.
AMERICAN NATURALIST (2005)
Models for estimating Bayes factors with applications to phylogeny and tests of monophyly
MA Suchard et al.
BIOMETRICS (2005)
Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the tertiary
M Lavin et al.
SYSTEMATIC BIOLOGY (2005)
Phylogeny can make the mid-domain effect an inappropriate null model
TJ Davies et al.
BIOLOGY LETTERS (2005)
Niche conservatism: Integrating evolution, ecology, and conservation biology
JJ Wiens et al.
ANNUAL REVIEW OF ECOLOGY EVOLUTION AND SYSTEMATICS (2005)
MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)
The mid-domain effect and species richness patterns: What have we learned so far?
RK Colwell et al.
AMERICAN NATURALIST (2004)
APE: Analyses of Phylogenetics and Evolution in R language
E Paradis et al.
BIOINFORMATICS (2004)
A phylogeny of legumes (Leguminosae) based on analyses of the plastid matK gene resolves many well-supported subclades within the family
MF Wojciechowski et al.
AMERICAN JOURNAL OF BOTANY (2004)
Unmatched tempo of evolution in Southern African semi-desert ice plants
C Klak et al.
NATURE (2004)
Model selection and model averaging in phylogenetics: Advantages of akaike information criterion and Bayesian approaches over likelihood ratio tests
D Posada et al.
SYSTEMATIC BIOLOGY (2004)
Bayesian estimation of ancestral character states on phylogenies
M Pagel et al.
SYSTEMATIC BIOLOGY (2004)
Testing the hypothesis that a clade has adaptively radiated: Iguanid lizard clades as a case study
JB Losos et al.
AMERICAN NATURALIST (2002)
A likelihood approach to estimating phylogeny from discrete morphological character data
PO Lewis
SYSTEMATIC BIOLOGY (2001)
Rapid diversification of a species-rich genus of neotropical rain forest trees
JE Richardson et al.
SCIENCE (2001)
Absolute diversification rates in angiosperm clades
S Magallón et al.
EVOLUTION (2001)
Rapid and recent origin of species richness in the Cape flora of South Africa
JE Richardson et al.
NATURE (2001)
Analysis of an evolutionary species-area relationship
JB Losos et al.
NATURE (2000)
Historical contingency and ecological determinism interact to prime speciation in sticklebacks, Gasterosteus
EB Taylor et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2000)
Why are there global gradients in species richness?: Mountains might hold the answer
C Körner
TRENDS IN ECOLOGY & EVOLUTION (2000)
Testing macro-evolutionary models using incomplete molecular phylogenies
OG Pybus et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2000)
Taxon sampling, correlated evolution, and independent contrasts
DD Ackerly
EVOLUTION (2000)
The mid-domain effect: geometric constraints on the geography of species richness
RK Colwell et al.
TRENDS IN ECOLOGY & EVOLUTION (2000)
Natural selection and parallel speciation in sympatric sticklebacks
HD Rundle et al.
SCIENCE (2000)