相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。The protein interaction network mediated by human SH3 domains
Martina Carducci et al.
BIOTECHNOLOGY ADVANCES (2012)
PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse
Peter V. Hornbeck et al.
NUCLEIC ACIDS RESEARCH (2012)
Yeast two-hybrid junk sequences contain selected linear motifs
Yun Liu et al.
NUCLEIC ACIDS RESEARCH (2011)
BisoGenet: a new tool for gene network building, visualization and analysis
Alexander Martin et al.
BMC BIOINFORMATICS (2010)
Phosphotyrosine Signaling: Evolving a New Cellular Communication System
Wendell A. Lim et al.
CELL (2010)
Negative regulation of CHK2 activity by protein phosphatase 2A is modulated by DNA damage
Alyson K. Freeman et al.
CELL CYCLE (2010)
Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes
Beate Neumann et al.
NATURE (2010)
The Pfam protein families database
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2010)
ATM-Dependent and -Independent Dynamics of the Nuclear Phosphoproteome After DNA Damage
Ariel Bensimon et al.
SCIENCE SIGNALING (2010)
14-3-3 proteins, FHA domains and BRCT domains in the DNA damage response
Duaa H. Mohammad et al.
DNA REPAIR (2009)
Dynamic modularity in protein interaction networks predicts breast cancer outcome
Ian W. Taylor et al.
NATURE BIOTECHNOLOGY (2009)
Literature-curated protein interaction datasets
Michael E. Cusick et al.
NATURE METHODS (2009)
Inhibition of Poly(ADP-Ribose) Polymerase in Tumors from BRCA Mutation Carriers.
Peter C. Fong et al.
NEW ENGLAND JOURNAL OF MEDICINE (2009)
Negative Regulation of AKT Activation by BRCA1
Tao Xiang et al.
CANCER RESEARCH (2008)
A protein domain-based interactome network for C-elegans early embryogenesis
Mike Boxem et al.
CELL (2008)
Understanding eukaryotic linear motifs and their role in cell signaling and regulation
Francesca Diella et al.
FRONTIERS IN BIOSCIENCE-LANDMARK (2008)
Structure of a second BRCT domain identified in the Nijmegen breakage syndrome protein Nbs1 and its function in an MDC1-dependent localization of Nbs1 to DNA damage sites
Chao Xu et al.
JOURNAL OF MOLECULAR BIOLOGY (2008)
The Structure of Fcp1, an Essential RNA Polymerase II CTD Phosphatase
Agnidipta Ghosh et al.
MOLECULAR CELL (2008)
Activation of the cellular DNA damage response in the absence of DNA lesions
Evi Soutoglou et al.
SCIENCE (2008)
Linear Motif Atlas for Phosphorylation-Dependent Signaling
Martin Lee Miller et al.
SCIENCE SIGNALING (2008)
DNA repair pathways as targets for cancer therapy
Thomas Helleday et al.
NATURE REVIEWS CANCER (2008)
The DNA damage response: Ten years after
J. Wade Harper et al.
MOLECULAR CELL (2007)
Network modeling links breast cancer susceptibility and centrosome dysfunction
Miguel Angel Pujana et al.
NATURE GENETICS (2007)
Identification of Protor as a novel Rictor-binding component of mTOR complex-2
Laura R. Pearce et al.
BIOCHEMICAL JOURNAL (2007)
Growth factor signaling pathways modulate BRCA1 repression of estrogen receptor-α activity
Yongxian Ma et al.
MOLECULAR ENDOCRINOLOGY (2007)
ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage
Shuhei Matsuoka et al.
SCIENCE (2007)
Abraxas and RAP80 form a BRCA1 protein complex required for the DNA damage response
Bin Wang et al.
SCIENCE (2007)
Proteomic screen defines the Polo-box domain interactome and identifies Rock2 as a Plk1 substrate
Drew M. Lowery et al.
EMBO JOURNAL (2007)
COMMD1 promotes the ubiquitination of NF-κB subunits through a cullin-containing ubiquitin ligase
Gabriel N. Maine et al.
EMBO JOURNAL (2007)
Increased activity of hypoxia-inducible factor 1 is associated with early embryonic lethality in Commd1 null mice
Bart van de Sluis et al.
MOLECULAR AND CELLULAR BIOLOGY (2007)
NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins
Kim D. Pruitt et al.
NUCLEIC ACIDS RESEARCH (2007)
The human and mouse complement of SH2 domain proteins -: Establishing the boundaries of phosphotyrosine signaling
Bernard A. Liu et al.
MOLECULAR CELL (2006)
A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration
Janghoo Lim et al.
CELL (2006)
Prolonged rapamycin treatment inhibits mTORC2 assembly and Akt/PKB
DD Sarbassov et al.
MOLECULAR CELL (2006)
XIAP is a copper binding protein dereaulated in Wilson's disease and other copper toxicosis disorders
AR Mufti et al.
MOLECULAR CELL (2006)
Multifactorial contributions to an acute DNA damage response by BRCA1/BARD1-containing complexes
RA Greenberg et al.
GENES & DEVELOPMENT (2006)
MDC1 directly binds phosphorylated histone H2AX to regulate cellular responses to DNA double-strand breaks
M Stucki et al.
CELL (2005)
Interactome: gateway into systems biology
ME Cusick et al.
HUMAN MOLECULAR GENETICS (2005)
Local modeling of global interactome networks
D Scholtens et al.
BIOINFORMATICS (2005)
DNA damage response as a candidate anti-cancer barrier in early human tumorigenesis
J Bartkova et al.
NATURE (2005)
Activation of the DNA damage checkpoint and genomic instability in human precancerous lesions
VG Gorgoulis et al.
NATURE (2005)
PermutMatrix: a graphical environment to arrange gene expression profiles in optimal linear order
G Caraux et al.
BIOINFORMATICS (2005)
Phosphorylation and regulation of Akt/PKB by the rictor-mTOR complex
DD Sarbassov et al.
SCIENCE (2005)
14-3-3-affinity purification of over 200 human phosphoproteins reveals new links to regulation of cellular metabolism, proliferation and trafficking
MP Rubio et al.
BIOCHEMICAL JOURNAL (2004)
A map of the interactome network of the metazoan C-elegans
SM Li et al.
SCIENCE (2004)
A novel role for XIAP in copper homeostasis through regulation of MURR1
E Burstein et al.
EMBO JOURNAL (2004)
A protein interaction network links GIT1, an enhancer of huntingtin aggregation, to Huntington's disease
H Goehler et al.
MOLECULAR CELL (2004)
Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization
J Jin et al.
CURRENT BIOLOGY (2004)
Comprehensive proteomic analysis of interphase and mitotic 14-3-3-binding proteins
SEM Meek et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Rictor, a novel binding partner of mTOR, defines a rapamycin-insensitive and raptor-independent pathway that regulates the cytoskeleton
DD Sarbassov et al.
CURRENT BIOLOGY (2004)
Structural basis of BACH1 phosphopeptide recognition by BRCA1 tandem BRCT domains
MVE Botuyan et al.
STRUCTURE (2004)
The role of BRCA1 in the cellular response to chemotherapy
RD Kennedy et al.
JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE (2004)
DNA damage-induced cell cycle checkpoint control requires CtIP, a phosphorylation-dependent binding partner of BRCA1 C-terminal domains
XC Yu et al.
MOLECULAR AND CELLULAR BIOLOGY (2004)
Structural basis of phosphopeptide recognition by the BRCT domain of BRCA1
RS Williams et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2004)
Structure-based assessment of missense mutations in human BRCA1: Implications for breast and ovarian cancer predisposition
N Mirkovic et al.
CANCER RESEARCH (2004)
Structure and mechanism of BRCA1 BRCT domain recognition of phosphorylated BACH1 with implications for cancer
JA Clapperton et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2004)
Structure of the BRCT repeats of BRCA1 bound to a BACH1 phosphopeptide: Implications for signaling
EN Shiozaki et al.
MOLECULAR CELL (2004)
Phosphopeptide binding specificities of BRCA1 COOH-terminal (BRCT) domains
M Rodriguez et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
A protein interaction map of Drosophila melanogaster
L Giot et al.
SCIENCE (2003)
BRCT repeats as phosphopeptide-binding modules involved in protein targeting
IA Manke et al.
SCIENCE (2003)
The BRCT domain is a phospho-protein binding domain
XC Yu et al.
SCIENCE (2003)
A statistical model for identifying proteins by tandem mass spectrometry
AI Nesvizhskii et al.
ANALYTICAL CHEMISTRY (2003)
Morphogenesis and oncogenesis of MCF-10A mammary epithelial acini grown in three-dimensional basement membrane cultures
J Debnath et al.
METHODS (2003)
Assembly of cell regulatory systems through protein interaction domains
T Pawson et al.
SCIENCE (2003)
How reliable are experimental protein-protein interaction data?
E Sprinzak et al.
JOURNAL OF MOLECULAR BIOLOGY (2003)
Genome-wide analysis of signaling domain function
JW Yu et al.
CURRENT OPINION IN CHEMICAL BIOLOGY (2003)
Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)
A transition probability model for amino acid substitutions from blocks
S Veerassamy et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2003)
The protein kinase complement of the human genome
G Manning et al.
SCIENCE (2002)
The third dimension for protein interactions and complexes
P Aloy et al.
TRENDS IN BIOCHEMICAL SCIENCES (2002)
Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
A Keller et al.
ANALYTICAL CHEMISTRY (2002)
Comparative assessment of large-scale data sets of protein-protein interactions
C von Mering et al.
NATURE (2002)
A combined experimental and computational strategy to define protein interaction networks for peptide recognition modules
AHY Tong et al.
SCIENCE (2002)
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
Y Ho et al.
NATURE (2002)
Combined functional genomic maps of the C-elegans DNA damage response
SJ Boulton et al.
SCIENCE (2002)
Structure of the 53BP1 BRCT region bound to p53 and its comparison to the Brcal1 BRCT structure
WS Joo et al.
GENES & DEVELOPMENT (2002)
A comprehensive two-hybrid analysis to explore the yeast protein interactome
T Ito et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
A motif-based profile scanning approach for genome-wide prediction of signaling pathways
MB Yaffe et al.
NATURE BIOTECHNOLOGY (2001)
Retinoblastoma susceptibility protein, Rb, possesses multiple BRCT-Ws, BRCA1 carboxyl-terminus-related W regions with DNA break-binding activity
K Yamane et al.
ONCOGENE (2000)