4.3 Article

The targets of CAPRI Rounds 13-19

期刊

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
卷 78, 期 15, 页码 3067-3072

出版社

WILEY
DOI: 10.1002/prot.22774

关键词

protein-protein interaction; protein docking; blind prediction; community-wide experiment

资金

  1. European Union
  2. French Ministry of Foreign Affairs
  3. Region Ile-de-France

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Seven rounds of CAPRI predictions with a total of 14 targets were held in the period June 2007 November 2009. In addition to protease/inhibitor complexes and complexes with G-proteins, some of the targets displayed novel features presenting new challenges to the predictors: a complex with RNA, a leucine zipper to be built ab initio, and a human-designed protein. Nine targets were unbound or required model building; the other five had a bound component. Thirteen were assessed, and the results show that the predictor and scorer groups submitted two- or three-star (medium or high quality) models for eight of them, one-star (acceptable) models for three but failed on the unbound RNA complex and another unbound target. Proteins 2010; 78:3067-3072. (C) 2010 Wiley-Liss, Inc.

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